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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TIGD4-2:1 | BRCA-Luminal A | 7 | 0.0613018 | noncoding | 63 | chr4 | 152934519 | 152936837 | - | 0.9972 | lnc-TIGD4-2 | 0.595 | -1.339 | -3.935 | -3.704 | 13 | noncoding | -0.350910294 | STVGVGR | n[145]STVGVGR | LAMQLVLQTRVHTGASSPPGTDRCSPWPVTWGASEKQVVKENIPGKPADRKSTVGVGRRPLRG |
lnc-TIGD4-2:1 | BRCA-Basal-like | 7 | 0.0613018 | noncoding | 63 | chr4 | 152934519 | 152936837 | - | 0.9972 | lnc-TIGD4-2 | 0.595 | -1.339 | -3.935 | -3.704 | 13 | noncoding | -0.350910294 | STVGVGR | n[145]STVGVGR | LAMQLVLQTRVHTGASSPPGTDRCSPWPVTWGASEKQVVKENIPGKPADRKSTVGVGRRPLRG |
lnc-TIGD4-2:1 | OV | 11 | 0.0613018 | noncoding | 43 | chr4 | 152934519 | 152936837 | - | 0.8574 | lnc-TIGD4-2 | 0.988 | -3.657 | -6.267 | -6.539 | 5 | noncoding | -0.350910294 | FFQLSISQYPK | n[145]FFQLSISQYPK | LDFSADPSLPLRTVTRFFQLSISQYPKEIPSDFKLNPSRCRGT |
lnc-TIGD5-1:1 | OV | 15 | 0.102834 | noncoding | 99 | chr8 | 143601245 | 143603224 | + | 0.4593 | lnc-TIGD5-1 | 0.095 | 0 | 0 | 0 | 1 | noncoding | -0.283816289 | HVGSHLSSQHFGRLR | n[145]HVGSHLSSQHFGRLR | LSPSPSMATFYKQGSTNFCYKIKEARHVGSHLSSQHFGRLRRVDHLRLGVRDQPGQHGENPVSTKNTKISWAWWQVPVTLATQEAEAREMLEARRQRLQ |
lnc-TIGD5-1:1 | OV | 12 | 0.102834 | noncoding | 99 | chr8 | 143601245 | 143603224 | + | 0.7499 | lnc-TIGD5-1 | 0.095 | 0 | 0 | 0 | 1 | noncoding | -0.283816289 | LSPSPSMATFYK | n[145]LSPSPSM[147]ATFYK | LSPSPSMATFYKQGSTNFCYKIKEARHVGSHLSSQHFGRLRRVDHLRLGVRDQPGQHGENPVSTKNTKISWAWWQVPVTLATQEAEAREMLEARRQRLQ |
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