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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-THOC3-2:15 | CCRC | 7 | 0.04841 | noncoding | 59 | chr5 | 176180006 | 176185156 | - | 0.998 | lnc-THOC3-2 | 0.105 | 0 | 0 | 0 | 4 | noncoding | -0.384642768 | FGQFGIK | n[230]FGQFGIK | LRRKVCILGALLSKERPSVLQNVALTSLLLLERHFGLSFLTEMRFGQFGIKNTESSKEL |
lnc-THOC3-2:17 | PRAD | 15 | 0.184492 | noncoding | 33 | chr5 | 176173221 | 176182795 | - | 0.8826 | lnc-THOC3-2 | 0.088 | 0 | 0 | 0 | 9 | noncoding | -0.352626402 | QSALSSSMAAVSEGK | LYTSRQSALSSSMAAVSEGKFPVFTPQIEMVWR | |
lnc-THOC3-2:6 | BRCA-Basal-like | 9 | 0.0991366 | noncoding | 95 | chr5 | 176173351 | 176199295 | - | 0.9953 | lnc-THOC3-2 | 0.192 | 0 | 0 | 0 | 19 | noncoding | -0.349405489 | SLTCGALGR | n[145]SLTCGALGR | LGMAKTTSGAPRLLTKSLTCGALGRSVKALNILRLPHCLEAPDTREFPVGPPAEPDDPGRPGSDVPLWMIPTPCCGFSPSRCCVFWGPCQLPSKC |
lnc-THOC3-2:6 | BRCA-Luminal B | 9 | 0.0991366 | noncoding | 95 | chr5 | 176173351 | 176199295 | - | 0.9953 | lnc-THOC3-2 | 0.192 | 0 | 0 | 0 | 19 | noncoding | -0.349405489 | SLTCGALGR | n[145]SLTCGALGR | LGMAKTTSGAPRLLTKSLTCGALGRSVKALNILRLPHCLEAPDTREFPVGPPAEPDDPGRPGSDVPLWMIPTPCCGFSPSRCCVFWGPCQLPSKC |
lnc-THOC3-2:6 | BRCA-HER2-enriched | 9 | 0.0991366 | noncoding | 95 | chr5 | 176173351 | 176199295 | - | 0.9953 | lnc-THOC3-2 | 0.192 | 0 | 0 | 0 | 19 | noncoding | -0.349405489 | SLTCGALGR | n[145]SLTCGALGR | LGMAKTTSGAPRLLTKSLTCGALGRSVKALNILRLPHCLEAPDTREFPVGPPAEPDDPGRPGSDVPLWMIPTPCCGFSPSRCCVFWGPCQLPSKC |
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