top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SRGAP3-AS3:2 | LUAD | 8 | 0.646355 | coding | 57 | chr3 | 9216894 | 9219508 | + | 0.9974 | SRGAP3-AS3 | 0.367 | -4.247 | -4.685 | -4.816 | 20 | noncoding | -0.352539803 | GILQFHSR | n[230]GILQFHSR | LAHQERGILQFHSRKTFLARLSNNANSLISEVVSPLLQEVPIRSLMVVEDSASDEGA |
SRGAP3-AS3:2 | OV | 8 | 0.646355 | coding | 57 | chr3 | 9216894 | 9219508 | + | 0.9996 | SRGAP3-AS3 | 0.367 | -4.247 | -4.685 | -4.816 | 2 | noncoding | -0.352539803 | GILQFHSR | n[145]GILQFHSR | LAHQERGILQFHSRKTFLARLSNNANSLISEVVSPLLQEVPIRSLMVVEDSASDEGA |
SRP14-AS1:27 | BRCA-HER2-enriched | 7 | 0.249008 | noncoding | 71 | chr15 | 40039319 | 40075169 | + | 0.9953 | SRP14-AS1 | 1 | 0.848 | 1.254 | -1.363 | 54 | coding | 0.700322291 | LRPDGAR | n[145]LRPDGAR | LAGGLAWRQHRLRPDGARADLARMGPTAGRFSHPGHKGTRPALGAGCHRGCAPCHRLHCQCGRAACQALSP |
SRP14-AS1:27 | BRCA-Luminal A | 7 | 0.249008 | noncoding | 71 | chr15 | 40039319 | 40075169 | + | 0.9953 | SRP14-AS1 | 1 | 0.848 | 1.254 | -1.363 | 54 | coding | 0.700322291 | LRPDGAR | n[145]LRPDGAR | LAGGLAWRQHRLRPDGARADLARMGPTAGRFSHPGHKGTRPALGAGCHRGCAPCHRLHCQCGRAACQALSP |
SRP14-AS1:27 | BRCA-Luminal B | 7 | 0.249008 | noncoding | 71 | chr15 | 40039319 | 40075169 | + | 0.9953 | SRP14-AS1 | 1 | 0.848 | 1.254 | -1.363 | 54 | coding | 0.700322291 | LRPDGAR | n[145]LRPDGAR | LAGGLAWRQHRLRPDGARADLARMGPTAGRFSHPGHKGTRPALGAGCHRGCAPCHRLHCQCGRAACQALSP |
Page 1 of 1
bottom of page