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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TM4SF20-1:2 | LUAD | 17 | 0.0345152 | noncoding | 46 | chr2 | 227245709 | 227325186 | - | 0.9975 | lnc-TM4SF20-1 | 0.062 | -4.628 | -5.313 | -4.261 | 14 | noncoding | -0.381013674 | KMGSFLPPNYAVGSGLK | KM[147]GSFLPPNYAVGSGLK | MRRKKMGSFLPPNYAVGSGLKECFQGKPVCLSLPFHLDLIIQQSIY |
lnc-TMC2-5:1 | EOGC | 7 | 0.0788574 | noncoding | 65 | chr20 | 2509199 | 2511660 | + | 0.9995 | lnc-TMC2-5 | 0.908 | 0 | -5.013 | 0 | 1 | noncoding | -0.379758429 | GIFWVSR | n[145]GIFWVSR | LVIKLFSFFSTFVKGIFWVSRRFCFYFLQHLLPSSYFFSPSQYQPSEASLFSSTQEIENMAPRPL |
lnc-TMC5-1:1 | PRAD | 17 | 0.105183 | noncoding | 38 | chr16 | 19501688 | 19502286 | + | 0.9764 | lnc-TMC5-1 | 0.026 | -3.945 | -5.125 | -5.636 | 3 | noncoding | -0.392018406 | KFASHCHIAMGTGGLLK | KFASHCHIAMGTGGLLK | MPMPIQSVTKKFASHCHIAMGTGGLLKSLSSCCKCEKR |
lnc-TMC5-1:1 | PRAD | 27 | 0.105183 | noncoding | 38 | chr16 | 19501688 | 19502286 | + | 0.0653 | lnc-TMC5-1 | 0.026 | -3.945 | -5.125 | -5.636 | 1 | noncoding | -0.392018406 | MPMPIQSVTKKFASHCHIAMGTGGLLK | M[147]PMPIQSVTKKFASHCHIAMGTGGLLK | MPMPIQSVTKKFASHCHIAMGTGGLLKSLSSCCKCEKR |
lnc-TMC6-1:1 | OSCC | 11 | 0.0131152 | noncoding | 89 | chr17 | 77799106 | 77802715 | - | 0.9604 | lnc-TMC6-1 | 1 | 0 | 0 | 0 | 52 | noncoding | -0.372195152 | TAEQHGEEETK | n[145]TAEQHGEEETK | LINAPAEKRNCPLKWLGKRLGGRVDINQSRPLRRTAEQHGEEETKEGGLPNSLEYYGGRSDQLMALDAMRTLQLLASSGQELSAAESGV |
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