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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TLX1-7:1 | BRCA-Basal-like | 9 | 0.156144 | noncoding | 52 | chr10 | 101233543 | 101234921 | + | 0.9999 | lnc-TLX1-7 | 1 | -4.426 | -6.174 | -4.476 | 2 | noncoding | -0.362448966 | LDVTVILPR | n[145]LDVTVILPR | LDVTVILPRMCCFVCLSCLSLSICCELGKEGPESPLHAPMPAQHTPRGPSIC |
lnc-TLX1-7:1 | HCC | 13 | 0.156144 | noncoding | 51 | chr10 | 101233543 | 101234921 | + | 0.9978 | lnc-TLX1-7 | 0.813 | -4.295 | -6.128 | -4.836 | 1 | noncoding | -0.362448966 | MEAASSQAWGAGR | n[272]MEAASSQAWGAGR | MEAASSQAWGAGRQLLQNSGWAPSLLLDLPCFFWPHPALRTSAGRKTWGTI |
lnc-TLX3-2:1 | BRCA-Luminal B | 13 | 0.0978359 | noncoding | 135 | chr5 | 171251865 | 171252982 | + | 0.5478 | lnc-TLX3-2 | 1 | 0 | 0 | 0 | 1 | coding | 0.589731752 | AFSNTETLCSEYK | n[145]AFSNTETLCSEYK | MSFLTTTCNKIPHEFLNYLLNTIADILQEERKQEKQNGRLPNGNINNENNNSTPDPMRVHEIFQGTLTNETRCLTCETMSSKDEDFLDLSVDVEQNTSITHCLRAFSNTETLCSEYKYYCEECRSKQEAHKRRKV |
lnc-TM2D2-3:1 | OV | 8 | 0.143397 | noncoding | 91 | chr8 | 38844865 | 38846439 | - | 0.9132 | lnc-TM2D2-3 | 0.992 | 0 | 0 | 0 | 5 | noncoding | -0.449864872 | LDNTPQDK | n[145]LDNTPQDK | MSLLMRCERHSFFFFFFFFLRWSLALSPRLEYSGAVSAHCKLRLPGSRHSPASASPSSWDYSMGDRVRLCLKKNQQKIKLDNTPQDKLQMY |
lnc-TM2D2-4:1 | EOGC | 10 | 0.317558 | noncoding | 73 | chr8 | 39157537 | 39158701 | - | 0.9975 | lnc-TM2D2-4 | 1 | -4.099 | 0 | 0 | 22 | noncoding | -0.29793516 | ETGLVSGEAR | n[145]ETGLVSGEAR | LQGEDDKKQLKKDFNSMLEYLHPDAPASSMYEEDPPNGHPGEQRHCDRETGLVSGEARGPGTCEASVWAGQDD |
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