top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TMEM253-3:1 | HCC | 14 | 0.36198 | noncoding | 110 | chr14 | 21162512 | 21163743 | + | 0.8666 | lnc-TMEM253-3 | 1 | 0 | 0 | 0 | 4 | coding | 0.682795913 | LFDGTWQDLTDEEK | n[230]LFDGTWQDLTDEEK | LARLFDGTWQDLTDEEKQEYLNEYKAEKIEYNEYMKSYHNSPMYLAYINAKSCAEAALEKESRQRQSCIEKGEPYMSIQRDEDPDDCDDGISVKQAYSHCLFPEKPQPHQ |
lnc-TMEM253-3:1 | HCC | 9 | 0.36198 | noncoding | 110 | chr14 | 21162512 | 21163743 | + | 0.2189 | lnc-TMEM253-3 | 1 | 0 | 0 | 0 | 2 | coding | 0.682795913 | SCAEAALEK | SCAEAALEK | LARLFDGTWQDLTDEEKQEYLNEYKAEKIEYNEYMKSYHNSPMYLAYINAKSCAEAALEKESRQRQSCIEKGEPYMSIQRDEDPDDCDDGISVKQAYSHCLFPEKPQPHQ |
lnc-TMEM253-3:1 | LUAD | 14 | 0.36198 | noncoding | 55 | chr14 | 21162512 | 21163743 | + | 0.4687 | lnc-TMEM253-3 | 1 | 0 | 0 | 0 | 2 | coding | 0.682795913 | IAAEIAQAEEQTHK | n[230]IAAEIAQAEEQTHK | LCGLKVEVDMEKIAAEIAQAEEQTHKRQEEREREVADQAKRSQSGIVPEQEHAAN |
lnc-TMEM253-3:1 | LUAD | 7 | 0.36198 | noncoding | 82 | chr14 | 21162512 | 21163743 | + | 0.9764 | lnc-TMEM253-3 | 1 | 0 | 0 | 0 | 1 | coding | 0.682795913 | LLMPYMR | n[230]LLM[147]PYMR | MPSTSGFVGYNPYSHLTYNNYRLGGNPGTNSRVMASSGIMIPKPPKPSDKLLMPYMRYSRKVWDQVKASNPDLKLWEIGKII |
lnc-TMEM253-3:1 | LUAD | 13 | 0.36198 | noncoding | 55 | chr14 | 21162512 | 21163743 | + | 0.1273 | lnc-TMEM253-3 | 1 | 0 | 0 | 0 | 1 | coding | 0.682795913 | QEEREREVADQAK | n[230]QEEREREVADQAK | LCGLKVEVDMEKIAAEIAQAEEQTHKRQEEREREVADQAKRSQSGIVPEQEHAAN |
Page 1 of 1
bottom of page