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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TMTC3-18:1 | OV | 14 | 0.0443867 | noncoding | 42 | chr12 | 88299969 | 88311915 | + | 0.9582 | lnc-TMTC3-18 | 0.411 | 0 | 0 | 0 | 30 | noncoding | -0.388799935 | TLSQFIWAWLDAIV | n[145]TLSQFIWAWLDAIV | LEQIPHGYQGRNIQIYIYVTLMGLWVRRTLSQFIWAWLDAIV |
lnc-TMTC3-18:2 | OV | 10 | 0.0919971 | noncoding | 57 | chr12 | 88299969 | 88341205 | + | 0.9107 | lnc-TMTC3-18 | 0.947 | 0 | 0 | 0 | 7 | noncoding | -0.342584335 | KITSVVNQIK | n[145]KITSVVNQIK | MTNKHMKRCSTSLIIREMQIKDKMRYHLMPIRMATIKKQTNKSRKITSVVNQIKEVR |
lnc-TMTC3-8:1 | OV | 19 | 0.997559 | coding | 245 | chr12 | 88233863 | 88235799 | + | 0.8415 | lnc-TMTC3-8 | 0.972 | 0 | 0 | 0 | 1 | noncoding | -0.328530301 | GWDPINLLGGWLSNLGGFK | n[145]GWDPINLLGGWLSNLGGFK | MNTSLQWIAPEGFFWICGTQAYSWLPYHWQGTCFLGIVKPGFFLLPKQVGNTLGVPVCDNLNREKQSLKVGGSQRWREDKWPLQWIIEYYGPATWAEDGSWGYHTPIYRLNRIIILQAILKIITNQTASALEMLAQQQNQMHTTTYQNRLTLDYLLAEEGGVYDKFNISNCCLNIEYNGKVVLEIASNIRKVAHVPVQTWKGWDPINLLGGWLSNLGGFKTLVETVIFIIGFLLFLPYPTDNESH |
lnc-TMTC4-1:1 | OV | 8 | 0.058646 | noncoding | 45 | chr13 | 100537322 | 100580117 | - | 0.5526 | lnc-TMTC4-1 | 0.023 | -3.797 | -3.502 | -5.061 | 1 | noncoding | -0.312403657 | VDGATTSY | n[145]VDGATTSY | LSWHLTTLFQSLCCFHRTVLTSFHFASSQPGGSLPARVDGATTSY |
lnc-TMTC4-1:2 | BRCA-Luminal B | 9 | 0.0933473 | noncoding | 51 | chr13 | 100535740 | 100580117 | - | 0.9958 | lnc-TMTC4-1 | 0.056 | 0 | -5.768 | 0 | 4 | noncoding | -0.301344231 | FLIEEMQDK | n[145]FLIEEMQDK | MNKKLKKKTHNKKNILEINIMAKKFLIEEMQDKAEYNIDLEERRKYKNIGG |
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