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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TNFSF9-3:1 | BRCA-Basal-like | 10 | 0.281794 | noncoding | 99 | chr19 | 6593328 | 6594055 | + | 0.9975 | lnc-TNFSF9-3 | 1 | 0 | 0 | 0 | 7 | coding | 0.674351323 | IRGIDGVSPK | n[145]IRGIDGVSPK | LKTKRLRKKFAQKMLRKARRKLIYEKLKHYHKEYRQRYRTEIRMEKMSRKAGNFYEPAESRLAFVIRIRGIDGVSPKVRNVLQLLCLCQIFNGTFVKAN |
lnc-TNFSF9-3:1 | BRCA-Basal-like | 16 | 0.281794 | noncoding | 99 | chr19 | 6593328 | 6594055 | + | 0.0799 | lnc-TNFSF9-3 | 1 | 0 | 0 | 0 | 1 | coding | 0.674351323 | LAFVIRIRGIDGVSPK | n[145]LAFVIRIRGIDGVSPK | LKTKRLRKKFAQKMLRKARRKLIYEKLKHYHKEYRQRYRTEIRMEKMSRKAGNFYEPAESRLAFVIRIRGIDGVSPKVRNVLQLLCLCQIFNGTFVKAN |
lnc-TNFSF9-3:1 | CCRC | 8 | 0.281794 | noncoding | 99 | chr19 | 6593328 | 6594055 | + | 0.9996 | lnc-TNFSF9-3 | 1 | 0 | 0 | 0 | 41 | coding | 0.674351323 | GIDGVSPK | n[230]GIDGVSPK | LKTKRLRKKFAQKMLRKARRKLIYEKLKHYHKEYRQRYRTEIRMEKMSRKAGNFYEPAESRLAFVIRIRGIDGVSPKVRNVLQLLCLCQIFNGTFVKAN |
lnc-TMSB4X-1:1 | CRC | 13 | 0.0500754 | noncoding | 55 | chrX | 13048111 | 13086068 | + | 0.7995 | lnc-TMSB4X-1 | 0.808 | -4.954 | -5.517 | -4.768 | 1 | noncoding | -0.459598655 | EVIPSAAVCDFFR | EVIPSAAVCDFFR | LFLRLFYCPAHTLPPREVIPSAAVCDFFRKSFSLCFSQDFVLPFLLFLGLSLDGT |
lnc-TMSB4X-6:1 | OV | 15 | 0.0552435 | noncoding | 36 | chrX | 13158862 | 13160904 | + | 0.5229 | lnc-TMSB4X-6 | 0.211 | -5.026 | -4.412 | -5.028 | 16 | noncoding | -0.423914926 | LESVGTCKGAESCVR | n[145]LESVGTCKGAESCVR | LESVGTCKGAESCVRIWRRKILGWSLQSGQLYVLRM |
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