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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TNFSF4-3:2 | OV | 22 | 0.987053 | coding | 53 | chr1 | 173209708 | 173477140 | - | 0.1764 | lnc-TNFSF4-3 | 0.333 | 0 | 0 | -4.873 | 1 | coding | 0.641468071 | SYFFLTGLVAVCIWCINICLDK | n[145]SYFFLTGLVAVCIWCINICLDK | LIELTGRSYFFLTGLVAVCIWCINICLDKLYWASRPDAELIFHLKRSVVSHTV |
lnc-TNFSF9-1:1 | OSCC | 7 | 0.0651383 | noncoding | 75 | chr19 | 6566080 | 6569214 | + | 0.9565 | lnc-TNFSF9-1 | 0.42 | 0 | 0 | 0 | 1 | noncoding | -0.413749715 | GFPGLMR | n[145]GFPGLMR | LALMLPKGFPGLMRTCPPPFPSGLEYLVGYKHFDSKSLGHGVPPRDMLGLGRQTHHPSNNMGQNRSLAIDVASGI |
lnc-TNFSF9-1:1 | OSCC | 16 | 0.0651383 | noncoding | 75 | chr19 | 6566080 | 6569214 | + | 0.1411 | lnc-TNFSF9-1 | 0.42 | 0 | 0 | 0 | 1 | noncoding | -0.413749715 | SLGHGVPPRDMLGLGR | n[145]SLGHGVPPRDMLGLGR | LALMLPKGFPGLMRTCPPPFPSGLEYLVGYKHFDSKSLGHGVPPRDMLGLGRQTHHPSNNMGQNRSLAIDVASGI |
lnc-TNFSF9-3:1 | BRCA-Basal-like | 8 | 0.281794 | noncoding | 99 | chr19 | 6593328 | 6594055 | + | 0.9999 | lnc-TNFSF9-3 | 1 | 0 | 0 | 0 | 92 | coding | 0.674351323 | GIDGVSPK | n[145]GIDGVSPK | LKTKRLRKKFAQKMLRKARRKLIYEKLKHYHKEYRQRYRTEIRMEKMSRKAGNFYEPAESRLAFVIRIRGIDGVSPKVRNVLQLLCLCQIFNGTFVKAN |
lnc-TNFSF9-3:1 | BRCA-HER2-enriched | 8 | 0.281794 | noncoding | 99 | chr19 | 6593328 | 6594055 | + | 0.9999 | lnc-TNFSF9-3 | 1 | 0 | 0 | 0 | 92 | coding | 0.674351323 | GIDGVSPK | n[145]GIDGVSPK | LKTKRLRKKFAQKMLRKARRKLIYEKLKHYHKEYRQRYRTEIRMEKMSRKAGNFYEPAESRLAFVIRIRGIDGVSPKVRNVLQLLCLCQIFNGTFVKAN |
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