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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TNNT3-4:1 | OSCC | 13 | 0.818379 | coding | 196 | chr11 | 1973758 | 1978444 | + | 0.2144 | lnc-TNNT3-4 | 0.996 | 0 | 0 | 0 | 3 | noncoding | -0.260619771 | SEVDGGDGCAAVR | n[145]SEVDGGDGCAAVR | LGWARFSSPLWLKPPGLQCWLEEGVGLPRRGDWQFFPPLFPNFQTGPLKNNEVQVVPLEPGSSLAVGLSFPCRSHLPPGAANDSQRLEGEAPLGCQAGRRAGAGQAKGATLLPRPGHPITAPHPLWPSVQPGPCCRCFPWDCRENNQDFCLLGRAGLPPHLIYWQGGWAPSGSFSLGRGRRSEVDGGDGCAAVRMD |
lnc-TNP1-5:1 | OSCC | 8 | 0.0674608 | noncoding | 54 | chr2 | 217062323 | 217066977 | - | 0.6024 | lnc-TNP1-5 | 0.042 | -5.233 | 0 | -3.382 | 6 | noncoding | -0.374185724 | LKEAPFAK | n[145]LKEAPFAK | LQKLKEAPFAKFFFVLFPTILLIRSTDSVRLRLVFRWHWIDRLILIGVGVSIFS |
lnc-TNPO1-2:1 | HCC | 22 | 0.098319 | noncoding | 53 | chr5 | 72599735 | 72600773 | + | 0.0967 | lnc-TNPO1-2 | 0.091 | -5.16 | -4.007 | -4.139 | 3 | noncoding | -0.397612038 | LFLSWRSQPGTTTESLSSEGQR | n[230]LFLSWRSQPGTTTESLSSEGQR | LQTWVACLSLGRLFLSWRSQPGTTTESLSSEGQRRRPPTGLLSPGARSRVRAT |
lnc-TNPO1-2:1 | HCC | 12 | 0.098319 | noncoding | 53 | chr5 | 72599735 | 72600773 | + | 0.6567 | lnc-TNPO1-2 | 0.091 | -5.16 | -4.007 | -4.139 | 1 | noncoding | -0.397612038 | LQTWVACLSLGR | n[230]LQTWVACLSLGR | LQTWVACLSLGRLFLSWRSQPGTTTESLSSEGQRRRPPTGLLSPGARSRVRAT |
lnc-TNPO3-5:1 | BRCA-Luminal B | 17 | 0.154543 | noncoding | 73 | chr7 | 129117512 | 129117827 | - | 0.9959 | lnc-TNPO3-5 | 1 | 0 | 0 | 0 | 10 | noncoding | -0.395752122 | GITWGEDTLIEYLENPK | n[145]GITWGEDTLIEYLENPK | MGDVEKSTNICVQKCAQCHTTEKGGKHKTEPNLHGLFGWKTGAIGFCYTDTSKNKGITWGEDTLIEYLENPKN |
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