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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TP53TG3-16:1 | OSCC | 46 | 0.0610527 | noncoding | 47 | chr16 | 32439068 | 32441159 | - | 0.8312 | lnc-TP53TG3-16 | 1 | 0 | 0 | 0 | 3 | noncoding | -0.369053773 | MVVTTKGLICVCFSSPEEATKGLSEMNGSIEGTEPLYIVLTPWEEK | n[145]M[147]VVTTKGLICVCFSSPEEATKGLSEMNGSIEGTEPLYIVLTPWEEK | MVVTTKGLICVCFSSPEEATKGLSEMNGSIEGTEPLYIVLTPWEEKQ |
lnc-TP53TG3-33:4 | LUAD | 9 | 0.0230755 | noncoding | 43 | chr16 | 33562648 | 33564346 | - | 0.9948 | lnc-TP53TG3-33 | 0.074 | 0 | 0 | 0 | 4 | noncoding | -0.357681081 | MALLFIYLR | n[230]MALLFIYLR | MALLFIYLRWSLTLLPSLKCSGASLAHCNLCFPDSSDSRASAS |
lnc-TP53TG3-34:1 | BRCA-Luminal B | 11 | 0.817761 | coding | 124 | chr16 | 33687329 | 33698504 | - | 0.9555 | lnc-TP53TG3-34 | 1 | 7.825 | -4.953 | -4.562 | 1 | noncoding | -0.289477085 | TEFEDQDDEAR | n[145]TEFEDQDDEAR | LNRTEFEDQDDEARVPYEGFRPGVYVRVEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGDVQMHLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWA |
lnc-TP53TG3-34:1 | EOGC | 11 | 0.817761 | coding | 124 | chr16 | 33687329 | 33698504 | - | 0.9999 | lnc-TP53TG3-34 | 1 | 7.825 | -4.953 | -4.562 | 6 | noncoding | -0.289477085 | TEFEDQDDEAR | n[145]TEFEDQDDEAR | LNRTEFEDQDDEARVPYEGFRPGVYVRVEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGDVQMHLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWA |
lnc-TP53TG3-34:1 | HCC | 11 | 0.817761 | coding | 124 | chr16 | 33687329 | 33698504 | - | 1 | lnc-TP53TG3-34 | 1 | 7.825 | -4.953 | -4.562 | 2 | noncoding | -0.289477085 | TEFEDQDDEAR | n[230]TEFEDQDDEAR | LNRTEFEDQDDEARVPYEGFRPGVYVRVEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGDVQMHLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWA |
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