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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TRA2A-1:2 | HCC | 11 | 0.999336 | coding | 484 | chr7 | 23583362 | 23680837 | - | 0.083 | lnc-TRA2A-1 | 1 | 0 | 0 | 0 | 1 | coding | 0.820151084 | VGGGGAALHRR | n[230]VGGGGAALHRR | LKQSPRTGLEVPGSRVGGGGAALHRRGGAGTPAAVPPPSWTSCGTSARAWPPERCLILEGTIPQSEAAGGVTVNTIGAENKQRRSRSWSSSSDRTRRRRREDSYHVRRRCSRTFSRSSSQHSSRKAKSVEDDTEGHLIYHVGDWLQERYEIVSTLGKGTFGRVVQCVDHRRRGARVALKIIKNVEKYKEAARLEIKVLEKINEKDPGKNLCVQMFDWFDYHGHMCISLELLGLSTFDFLKDNNHLPYPIHQVHHMASQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRHERSVKSTAVRVGDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRQHLATMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRQYLTSEAEEDHQLFDLIESMLEYEPAQRLTLGEALQHPFFSRLWAEPPNKLWDSSQDISP |
lnc-TRA2A-1:2 | HCC | 9 | 0.999336 | coding | 484 | chr7 | 23583362 | 23680837 | - | 0.8475 | lnc-TRA2A-1 | 1 | 0 | 0 | 0 | 11 | coding | 0.820151084 | YEIVSTLGK | n[230]YEIVSTLGK | LKQSPRTGLEVPGSRVGGGGAALHRRGGAGTPAAVPPPSWTSCGTSARAWPPERCLILEGTIPQSEAAGGVTVNTIGAENKQRRSRSWSSSSDRTRRRRREDSYHVRRRCSRTFSRSSSQHSSRKAKSVEDDTEGHLIYHVGDWLQERYEIVSTLGKGTFGRVVQCVDHRRRGARVALKIIKNVEKYKEAARLEIKVLEKINEKDPGKNLCVQMFDWFDYHGHMCISLELLGLSTFDFLKDNNHLPYPIHQVHHMASQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRHERSVKSTAVRVGDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRQHLATMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRQYLTSEAEEDHQLFDLIESMLEYEPAQRLTLGEALQHPFFSRLWAEPPNKLWDSSQDISP |
lnc-TRA2A-7:1 | CCRC | 7 | 0.213307 | noncoding | 101 | chr7 | 23721310 | 23721782 | - | 0.8374 | lnc-TRA2A-7 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.353437468 | LACIYIR | n[230]LACIYIR | LACIYIRRTLRNFINDEMQAKGIPQRAPPKRKKKKRVKQRTNTYIFVGNQLIPQPLDREEDEKMEDNKEEEEKDHSEAMKPEEPPQNLLRKKSQRCPFLNL |
lnc-TRA2A-7:1 | HCC | 7 | 0.213307 | noncoding | 101 | chr7 | 23721310 | 23721782 | - | 0.969 | lnc-TRA2A-7 | 1 | 0 | 0 | 0 | 6 | noncoding | -0.353437468 | LACIYIR | n[230]LACIYIR | LACIYIRRTLRNFINDEMQAKGIPQRAPPKRKKKKRVKQRTNTYIFVGNQLIPQPLDREEDEKMEDNKEEEEKDHSEAMKPEEPPQNLLRKKSQRCPFLNL |
lnc-TP53TG3C-11:1 | CRC | 9 | 0.153995 | noncoding | 94 | chr16 | 32915073 | 32915536 | + | 0.6592 | lnc-TP53TG3C-11 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.361979485 | GLEWVGCIK | GLEWVGCIK | LREALVQPGGSLRLSCAASGFTCSNAWMSWVRQAPGKGLEWVGCIKSKANGGTTDYAAPVKGRFTISRDDSKNTLYLQMISLKTEDTAVYYCTT |
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