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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TRAPPC2L-3:1 | OV | 20 | 0.450755 | noncoding | 164 | chr16 | 88870741 | 88874854 | + | 0.9133 | lnc-TRAPPC2L-3 | 0.448 | 0 | 0 | 0 | 25 | noncoding | -0.270383746 | VAWCMVGGYAGQMAFIFGSR | n[145]VAWCMVGGYAGQMAFIFGSR | LGRSCLASRDSANTRPGFPDTLHPGHPLLLSPGLSFPSCPDSLWPSATGLHLPGLWPGPHASFALVLRVAWCMVGGYAGQMAFIFGSRADPFPRSEVTGPVSPSALWSGPWRLLARSMQPAGAHATVPGTPVCTQRRIQGGEGKRGGFCPQSKLVSPPRSPPQS |
lnc-TRAPPC2L-3:1 | OV | 20 | 0.450755 | noncoding | 164 | chr16 | 88870741 | 88874854 | + | 0.9133 | lnc-TRAPPC2L-3 | 0.448 | 0 | 0 | 0 | 25 | noncoding | -0.270383746 | VAWCMVGGYAGQMAFIFGSR | n[145]VAWCMVGGYAGQM[147]AFIFGSR | LGRSCLASRDSANTRPGFPDTLHPGHPLLLSPGLSFPSCPDSLWPSATGLHLPGLWPGPHASFALVLRVAWCMVGGYAGQMAFIFGSRADPFPRSEVTGPVSPSALWSGPWRLLARSMQPAGAHATVPGTPVCTQRRIQGGEGKRGGFCPQSKLVSPPRSPPQS |
lnc-TRAPPC2L-3:1 | OV | 20 | 0.450755 | noncoding | 164 | chr16 | 88870741 | 88874854 | + | 0.9133 | lnc-TRAPPC2L-3 | 0.448 | 0 | 0 | 0 | 25 | noncoding | -0.270383746 | VAWCMVGGYAGQMAFIFGSR | n[145]VAWCM[147]VGGYAGQMAFIFGSR | LGRSCLASRDSANTRPGFPDTLHPGHPLLLSPGLSFPSCPDSLWPSATGLHLPGLWPGPHASFALVLRVAWCMVGGYAGQMAFIFGSRADPFPRSEVTGPVSPSALWSGPWRLLARSMQPAGAHATVPGTPVCTQRRIQGGEGKRGGFCPQSKLVSPPRSPPQS |
lnc-TRAPPC2L-3:1 | OV | 20 | 0.450755 | noncoding | 164 | chr16 | 88870741 | 88874854 | + | 0.9133 | lnc-TRAPPC2L-3 | 0.448 | 0 | 0 | 0 | 25 | noncoding | -0.270383746 | VAWCMVGGYAGQMAFIFGSR | n[145]VAWCM[147]VGGYAGQM[147]AFIFGSR | LGRSCLASRDSANTRPGFPDTLHPGHPLLLSPGLSFPSCPDSLWPSATGLHLPGLWPGPHASFALVLRVAWCMVGGYAGQMAFIFGSRADPFPRSEVTGPVSPSALWSGPWRLLARSMQPAGAHATVPGTPVCTQRRIQGGEGKRGGFCPQSKLVSPPRSPPQS |
lnc-TRAPPC6A-3:3 | BRCA-HER2-enriched | 10 | 0.193504 | noncoding | 138 | chr19 | 45238631 | 45245370 | - | 0.964 | lnc-TRAPPC6A-3 | 1 | 14.808 | -4.813 | -3.817 | 3 | noncoding | -0.26725896 | AGSPGDGQPR | n[145]AGSPGDGQPR | MPILKNLGVSDPKVPRAGTLPLRSSRNPFEEVSGLEEEEAGELGSLPNGTSCRRRATLEKLAGLAPFRLGWAPGRRAGSPGDGQPRSFLGRVLVPGIRRSSADFGLLARLHGTRAHGDEEAAGEAARRLAFLRLGRGS |
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