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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TRAPPC6A-3:3 | HCC | 8 | 0.193504 | noncoding | 138 | chr19 | 45238631 | 45245370 | - | 0.9558 | lnc-TRAPPC6A-3 | 1 | 14.808 | -4.813 | -3.817 | 1 | noncoding | -0.26725896 | LAGLAPFR | n[230]LAGLAPFR | MPILKNLGVSDPKVPRAGTLPLRSSRNPFEEVSGLEEEEAGELGSLPNGTSCRRRATLEKLAGLAPFRLGWAPGRRAGSPGDGQPRSFLGRVLVPGIRRSSADFGLLARLHGTRAHGDEEAAGEAARRLAFLRLGRGS |
lnc-TRAPPC6A-3:3 | HCC | 7 | 0.193504 | noncoding | 138 | chr19 | 45238631 | 45245370 | - | 0.9349 | lnc-TRAPPC6A-3 | 1 | 14.808 | -4.813 | -3.817 | 9 | noncoding | -0.26725896 | LGWAPGR | n[230]LGWAPGR | MPILKNLGVSDPKVPRAGTLPLRSSRNPFEEVSGLEEEEAGELGSLPNGTSCRRRATLEKLAGLAPFRLGWAPGRRAGSPGDGQPRSFLGRVLVPGIRRSSADFGLLARLHGTRAHGDEEAAGEAARRLAFLRLGRGS |
lnc-TRAPPC6A-3:3 | HCC | 8 | 0.193504 | noncoding | 138 | chr19 | 45238631 | 45245370 | - | 0.9983 | lnc-TRAPPC6A-3 | 1 | 14.808 | -4.813 | -3.817 | 10 | noncoding | -0.26725896 | NLGVSDPK | n[230]NLGVSDPK | MPILKNLGVSDPKVPRAGTLPLRSSRNPFEEVSGLEEEEAGELGSLPNGTSCRRRATLEKLAGLAPFRLGWAPGRRAGSPGDGQPRSFLGRVLVPGIRRSSADFGLLARLHGTRAHGDEEAAGEAARRLAFLRLGRGS |
lnc-TRAPPC6A-3:3 | HCC | 10 | 0.193504 | noncoding | 138 | chr19 | 45238631 | 45245370 | - | 0.9996 | lnc-TRAPPC6A-3 | 1 | 14.808 | -4.813 | -3.817 | 2 | noncoding | -0.26725896 | SSADFGLLAR | n[230]SSADFGLLAR | MPILKNLGVSDPKVPRAGTLPLRSSRNPFEEVSGLEEEEAGELGSLPNGTSCRRRATLEKLAGLAPFRLGWAPGRRAGSPGDGQPRSFLGRVLVPGIRRSSADFGLLARLHGTRAHGDEEAAGEAARRLAFLRLGRGS |
lnc-TRAPPC6A-3:3 | LUAD | 10 | 0.193504 | noncoding | 138 | chr19 | 45238631 | 45245370 | - | 0.9995 | lnc-TRAPPC6A-3 | 1 | 14.808 | -4.813 | -3.817 | 9 | noncoding | -0.26725896 | AGSPGDGQPR | n[230]AGSPGDGQPR | MPILKNLGVSDPKVPRAGTLPLRSSRNPFEEVSGLEEEEAGELGSLPNGTSCRRRATLEKLAGLAPFRLGWAPGRRAGSPGDGQPRSFLGRVLVPGIRRSSADFGLLARLHGTRAHGDEEAAGEAARRLAFLRLGRGS |
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