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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TROVE2-3:2 | BRCA-Luminal A | 13 | 0.0414312 | noncoding | 37 | chr1 | 192946862 | 192955363 | + | 0.9953 | lnc-TROVE2-3 | 0.883 | 0 | 0 | 0 | 13 | noncoding | -0.401549509 | HSFNILLCSNNLK | n[145]HSFNILLCSNNLK | LLSLNLTANKFNTSEITKEEKHSFNILLCSNNLKIYK |
lnc-TROVE2-3:2 | BRCA-Basal-like | 13 | 0.0414312 | noncoding | 37 | chr1 | 192946862 | 192955363 | + | 0.9953 | lnc-TROVE2-3 | 0.883 | 0 | 0 | 0 | 13 | noncoding | -0.401549509 | HSFNILLCSNNLK | n[145]HSFNILLCSNNLK | LLSLNLTANKFNTSEITKEEKHSFNILLCSNNLKIYK |
lnc-TRPC5-3:1 | EOGC | 13 | 0.62341 | coding | 264 | chrX | 111619483 | 111621517 | - | 0.1182 | lnc-TRPC5-3 | 1 | 0 | 0 | 0 | 4 | coding | 0.77661561 | ESKKSLENETLNK | n[145]ESKKSLENETLNK | LNLKPWSTLKQDDSSASTSQSTRAASIFGGAKPVDTAAREREVEERLQKEQEKLQRQLSEPKLERRPRERHPSWRSEETQERERSRTGSESSQTGTSTTSGRNARRRESKKSLENETLNKEEDCHSPTSKPPKPDQPLKVMPAPPPKENAWVKRSSNPPARSQSSDAEQQSPTSGGGKVAPAQPSEEGPARQDENKVDGMNVPKGQTGNSSRGPGDGGNKDHWKESDRKDGKKDQDSRSAPEPKKPEENPASKFSSASNYAALS |
lnc-TRPC5-3:1 | EOGC | 13 | 0.62341 | coding | 264 | chrX | 111619483 | 111621517 | - | 0.929 | lnc-TRPC5-3 | 1 | 0 | 0 | 0 | 12 | coding | 0.77661561 | QDDSSASTSQSTR | n[145]QDDSSASTSQSTR | LNLKPWSTLKQDDSSASTSQSTRAASIFGGAKPVDTAAREREVEERLQKEQEKLQRQLSEPKLERRPRERHPSWRSEETQERERSRTGSESSQTGTSTTSGRNARRRESKKSLENETLNKEEDCHSPTSKPPKPDQPLKVMPAPPPKENAWVKRSSNPPARSQSSDAEQQSPTSGGGKVAPAQPSEEGPARQDENKVDGMNVPKGQTGNSSRGPGDGGNKDHWKESDRKDGKKDQDSRSAPEPKKPEENPASKFSSASNYAALS |
lnc-TRPC5-3:1 | EOGC | 24 | 0.62341 | coding | 264 | chrX | 111619483 | 111621517 | - | 0.19 | lnc-TRPC5-3 | 1 | 0 | 0 | 0 | 4 | coding | 0.77661561 | VDGMNVPKGQTGNSSRGPGDGGNK | n[145]VDGM[147]NVPKGQTGNSSRGPGDGGNK | LNLKPWSTLKQDDSSASTSQSTRAASIFGGAKPVDTAAREREVEERLQKEQEKLQRQLSEPKLERRPRERHPSWRSEETQERERSRTGSESSQTGTSTTSGRNARRRESKKSLENETLNKEEDCHSPTSKPPKPDQPLKVMPAPPPKENAWVKRSSNPPARSQSSDAEQQSPTSGGGKVAPAQPSEEGPARQDENKVDGMNVPKGQTGNSSRGPGDGGNKDHWKESDRKDGKKDQDSRSAPEPKKPEENPASKFSSASNYAALS |
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