top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TBX2-AS1:20 | OSCC | 14 | 0.115103 | noncoding | 114 | chr17 | 61392880 | 61395574 | - | 0.7879 | TBX2-AS1 | 0.65 | 0 | 0 | -4.24 | 2 | noncoding | -0.299635219 | SAVGGLPSSYTGAR | n[145]SAVGGLPSSYTGAR | LRCQGCHPPLGSCSEFETYRMHCPFASRASSSRSAVGGLPSSYTGAREQLQIQSLSPGRKPDGVRMGISGVSILDGIGAQDREVSSDLGPSKGTGQGVKQPGADRDRLTRRVTL |
TBX2-AS1:4 | BRCA-Basal-like | 13 | 0.0146092 | noncoding | 197 | chr17 | 61393453 | 61399926 | - | 0.7007 | TBX2-AS1 | 1 | 7.571 | 4.769 | 2.724 | 2 | coding | 0.723333737 | GGLGEGVGSLSSK | n[145]GGLGEGVGSLSSK | LIADFTLFGPIVGLRGRGFDSSGQAPAGRGGLGEGVGSLSSKKTCQQNKILTNDGPPGPETPPPAPAPTARPRLRLPAPDWRARRADLTRRKGLRRGEPGSRGLGEGPAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLASDPAPGRGAAWGSLRPGKRQQALESEAGGRASREARAAEVRERIPGGGSW |
TBX2-AS1:4 | BRCA-HER2-enriched | 13 | 0.0146092 | noncoding | 197 | chr17 | 61393453 | 61399926 | - | 0.7007 | TBX2-AS1 | 1 | 7.571 | 4.769 | 2.724 | 2 | coding | 0.723333737 | GGLGEGVGSLSSK | n[145]GGLGEGVGSLSSK | LIADFTLFGPIVGLRGRGFDSSGQAPAGRGGLGEGVGSLSSKKTCQQNKILTNDGPPGPETPPPAPAPTARPRLRLPAPDWRARRADLTRRKGLRRGEPGSRGLGEGPAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLASDPAPGRGAAWGSLRPGKRQQALESEAGGRASREARAAEVRERIPGGGSW |
TCF4-AS1:1 | EOGC | 7 | 0.00412472 | noncoding | 54 | chr18 | 55452532 | 55482940 | + | 0.9651 | TCF4-AS1 | 0.171 | 0 | -3.646 | 0 | 2 | noncoding | -0.377160941 | LAFGSAK | n[145]LAFGSAK | LAFGSAKDHPGDWRKEWLVAGATGLLRDKGALDRLAESQARDLKEKVLGKAKLP |
TCL6:9 | OV | 26 | 0.109597 | noncoding | 92 | chr14 | 95652094 | 95654780 | + | 0.7837 | TCL6 | 0.351 | 0 | 0 | 0 | 5 | noncoding | -0.387685176 | VISLCARPECSGAITAHCSLNLLGSR | n[145]VISLCARPECSGAITAHCSLNLLGSR | MKVISLCARPECSGAITAHCSLNLLGSRDPPTSASQAAKTTGTCHHIWQIKKKIIEMGSPCVSLVGLKLLGSSDPPILASQLTGITGICHCA |
Page 1 of 1
bottom of page