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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSFM-2:1 | HCC | 7 | 0.011905 | noncoding | 103 | chr12 | 57814493 | 57814926 | + | 0.9988 | lnc-TSFM-2 | 0.925 | -2.324 | -2.718 | -3.404 | 24 | noncoding | -0.368963415 | SAGLCAK | SAGLCAK | LSRCASTSNALPNADHWVLAQAHVRKNTWILWGRGRWRITFGECQRSAGLCAKCLIFGVWVRALIYHCMYGLALEDCSHSLDVDFHHTPQVRETCGHTCVCSM |
lnc-TSFM-2:1 | LUAD | 9 | 0.011905 | noncoding | 103 | chr12 | 57814493 | 57814926 | + | 0.1452 | lnc-TSFM-2 | 0.925 | -2.324 | -2.718 | -3.404 | 2 | noncoding | -0.368963415 | CLIFGVWVR | n[230]CLIFGVWVR | LSRCASTSNALPNADHWVLAQAHVRKNTWILWGRGRWRITFGECQRSAGLCAKCLIFGVWVRALIYHCMYGLALEDCSHSLDVDFHHTPQVRETCGHTCVCSM |
lnc-TSFM-2:1 | LUAD | 8 | 0.011905 | noncoding | 103 | chr12 | 57814493 | 57814926 | + | 0.9348 | lnc-TSFM-2 | 0.925 | -2.324 | -2.718 | -3.404 | 1 | noncoding | -0.368963415 | NTWILWGR | n[230]NTWILWGR | LSRCASTSNALPNADHWVLAQAHVRKNTWILWGRGRWRITFGECQRSAGLCAKCLIFGVWVRALIYHCMYGLALEDCSHSLDVDFHHTPQVRETCGHTCVCSM |
lnc-TSFM-2:1 | LUAD | 7 | 0.011905 | noncoding | 103 | chr12 | 57814493 | 57814926 | + | 0.9996 | lnc-TSFM-2 | 0.925 | -2.324 | -2.718 | -3.404 | 19 | noncoding | -0.368963415 | SAGLCAK | n[230]SAGLCAK | LSRCASTSNALPNADHWVLAQAHVRKNTWILWGRGRWRITFGECQRSAGLCAKCLIFGVWVRALIYHCMYGLALEDCSHSLDVDFHHTPQVRETCGHTCVCSM |
lnc-TSFM-3:1 | BRCA-Basal-like | 11 | 0.112412 | noncoding | 88 | chr12 | 57847220 | 57848027 | + | 0.8577 | lnc-TSFM-3 | 0.725 | 0 | 0 | 0 | 2 | noncoding | -0.356989241 | AGTDLGTVSPK | n[145]AGTDLGTVSPK | LLEPGRRRLQVAEIAPLHSSLGDRARLCLKKKKKKVQPSNPERGVCVWADLGLQSIRAGTDLGTVSPKTLKMRPEVLGFPHTHRLTPI |
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