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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSC22D1-4:1 | EOGC | 8 | 0.254798 | noncoding | 43 | chr13 | 44369364 | 44369877 | - | 0.9998 | lnc-TSC22D1-4 | 0.928 | 0 | 0 | 0 | 11 | noncoding | -0.403050586 | ALDVWLYR | n[145]ALDVWLYR | MPSQFSAFRARNPNKPMPINHKSAPLRALDVWLYRLSFTHLYK |
lnc-TSC22D2-8:1 | CCRC | 15 | 0.0456342 | noncoding | 66 | chr3 | 150240338 | 150243142 | + | 0.9973 | lnc-TSC22D2-8 | 0.217 | 0 | 0 | 0 | 60 | noncoding | -0.38873911 | FVQGLLLGSLDIIQR | n[230]FVQGLLLGSLDIIQR | LGLHCARPPQEFSKWRISGGNITPDSSEVSTFKFVQGLLLGSLDIIQRVHRLVGLEEESLFPLTSL |
lnc-TSC22D2-8:1 | HCC | 8 | 0.0456342 | noncoding | 36 | chr3 | 150240338 | 150243142 | + | 0.9985 | lnc-TSC22D2-8 | 0.078 | -5.248 | -4.011 | -6.647 | 23 | noncoding | -0.38873911 | YLDDTLLK | n[230]YLDDTLLK | LSQQQSRTSSTNKYLDDTLLKQLPLTPDRLRGHFAL |
lnc-TSFM-2:1 | BRCA-Luminal B | 7 | 0.011905 | noncoding | 103 | chr12 | 57814493 | 57814926 | + | 0.9989 | lnc-TSFM-2 | 0.925 | -2.324 | -2.718 | -3.404 | 27 | noncoding | -0.368963415 | SAGLCAK | n[145]SAGLCAK | LSRCASTSNALPNADHWVLAQAHVRKNTWILWGRGRWRITFGECQRSAGLCAKCLIFGVWVRALIYHCMYGLALEDCSHSLDVDFHHTPQVRETCGHTCVCSM |
lnc-TSFM-2:1 | BRCA-HER2-enriched | 7 | 0.011905 | noncoding | 103 | chr12 | 57814493 | 57814926 | + | 0.9989 | lnc-TSFM-2 | 0.925 | -2.324 | -2.718 | -3.404 | 27 | noncoding | -0.368963415 | SAGLCAK | n[145]SAGLCAK | LSRCASTSNALPNADHWVLAQAHVRKNTWILWGRGRWRITFGECQRSAGLCAKCLIFGVWVRALIYHCMYGLALEDCSHSLDVDFHHTPQVRETCGHTCVCSM |
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