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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TRUB2-2:1 | OV | 23 | 0.383815 | noncoding | 174 | chr9 | 128450830 | 128452052 | - | 0.5367 | lnc-TRUB2-2 | 0.871 | 0 | 0 | 0 | 3 | noncoding | -0.375481954 | SSEAISLSDLCILHLPSPHGELR | n[145]SSEAISLSDLCILHLPSPHGELR | LRAISQEQLHPLRGDAGATGQGSHLENHRSILQTHRPPRSSEAISLSDLCILHLPSPHGELRGTPALAKMELMVYTETSRSMCISENKGNLRNSLAPNTQTTQTRNSVHPPLVSRVSTSGAQGLGLGQDLQPLQLWEPSRPSSDAPSSMRPAVAPTSQDALMAPSWVWVPISLL |
lnc-TSC22D1-2:2 | BRCA-HER2-enriched | 8 | 0.121472 | noncoding | 67 | chr13 | 44370210 | 44373841 | - | 0.9972 | lnc-TSC22D1-2 | 0.202 | 0 | 0 | 0 | 89 | noncoding | -0.277037449 | FLEGGVLR | n[145]FLEGGVLR | LLSSGEQNIRFLEGGVLREDMEAPQPFPHFLPCASLPSHCSSICFVISFLINEQTEVKCFTEFCDPL |
lnc-TSC22D1-2:2 | BRCA-Luminal A | 8 | 0.121472 | noncoding | 67 | chr13 | 44370210 | 44373841 | - | 0.9972 | lnc-TSC22D1-2 | 0.202 | 0 | 0 | 0 | 89 | noncoding | -0.277037449 | FLEGGVLR | n[145]FLEGGVLR | LLSSGEQNIRFLEGGVLREDMEAPQPFPHFLPCASLPSHCSSICFVISFLINEQTEVKCFTEFCDPL |
lnc-TSC22D1-2:2 | BRCA-Basal-like | 8 | 0.121472 | noncoding | 67 | chr13 | 44370210 | 44373841 | - | 0.9972 | lnc-TSC22D1-2 | 0.202 | 0 | 0 | 0 | 89 | noncoding | -0.277037449 | FLEGGVLR | n[145]FLEGGVLR | LLSSGEQNIRFLEGGVLREDMEAPQPFPHFLPCASLPSHCSSICFVISFLINEQTEVKCFTEFCDPL |
lnc-TSC22D1-2:2 | BRCA-Luminal B | 8 | 0.121472 | noncoding | 67 | chr13 | 44370210 | 44373841 | - | 0.9972 | lnc-TSC22D1-2 | 0.202 | 0 | 0 | 0 | 89 | noncoding | -0.277037449 | FLEGGVLR | n[145]FLEGGVLR | LLSSGEQNIRFLEGGVLREDMEAPQPFPHFLPCASLPSHCSSICFVISFLINEQTEVKCFTEFCDPL |
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