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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSHZ2-2:2 | LUAD | 17 | 0.123534 | noncoding | 88 | chr20 | 53608084 | 53609314 | + | 0.7879 | lnc-TSHZ2-2 | 0.352 | -4.726 | 0 | 0 | 5 | noncoding | -0.327955871 | RSPQPSHSGFSQNPVSR | LRWPKASSPLPAEGLKRSPQPSHSGFSQNPVSRDRLDSNPAAALSRWESRALASPSSQPHLQNGRVPRVKCPHHHEALKRCLAHGDTQ | |
lnc-TSN-10:1 | CCRC | 8 | 0.0266021 | noncoding | 51 | chr2 | 121506913 | 121513172 | + | 0.9994 | lnc-TSN-10 | 0.085 | 0 | 0 | 0 | 20 | noncoding | -0.425101272 | GSEGSQFR | n[230]GSEGSQFR | LGRGKNMKTSSLLKLQKLAGCGGGFARGSEGSQFRLKQASQTYTTGREVSK |
lnc-TSN-10:1 | CCRC | 10 | 0.0266021 | noncoding | 51 | chr2 | 121506913 | 121513172 | + | 0.1796 | lnc-TSN-10 | 0.085 | 0 | 0 | 0 | 1 | noncoding | -0.425101272 | LAGCGGGFAR | n[230]LAGCGGGFAR | LGRGKNMKTSSLLKLQKLAGCGGGFARGSEGSQFRLKQASQTYTTGREVSK |
lnc-TSN-14:3 | OV | 23 | 0.0824737 | noncoding | 88 | chr2 | 121902489 | 121958072 | + | 0.702 | lnc-TSN-14 | 0.212 | -4.69 | -5.187 | -5.563 | 1 | noncoding | -0.324895133 | EDFLDNAVSANLEGIISALDNAR | n[145]EDFLDNAVSANLEGIISALDNAR | MERPHCLMEGLENNFVAFYAQLLGSSPKFTHLQHSLRTLWASMFREDFLDNAVSANLEGIISALDNARIRLTYFTSFSSSPSFSHIAL |
lnc-TSN-14:7 | OSCC | 11 | 0.693932 | coding | 45 | chr2 | 121902489 | 122252861 | + | 0.8282 | lnc-TSN-14 | 0.043 | -4.8 | -4.305 | -5.33 | 3 | noncoding | -0.351201822 | TAIMLGTQNMK | n[145]TAIM[147]LGTQNM[147]K | LSAGGADCQACIGRRTAIMLGTQNMKCSSLTFLLTTANTRGVVQV |
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