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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSPOAP1-1:1 | OV | 16 | 0.531384 | coding | 79 | chr17 | 58329667 | 58332520 | - | 0.7229 | lnc-TSPOAP1-1 | 1 | -4.761 | -4.595 | -3.026 | 2 | noncoding | -0.329170749 | SEEGSGPGQATAGGEK | n[145]SEEGSGPGQATAGGEK | LDCASLLSETLLLGWGAECGRQAHGQYGRTEGLGGRTSVAPPEDTGLALPMRSEEGSGPGQATAGGEKGLGHLQKGAGM |
lnc-TSPY10-10:1 | OV | 14 | 0.534938 | coding | 87 | chrY | 10088025 | 10089586 | + | 0.0603 | lnc-TSPY10-10 | 0.905 | 0 | 0 | 0 | 1 | noncoding | -0.349635454 | ALLCPALALEPRQL | n[145]ALLCPALALEPRQL | LGSPLALCLAVEKLFWIPHCPSCKAPSCLTHPEPPGLPESNSWPSPAGPFSHNAHSIVACPKEDLAHGQQSRKALLCPALALEPRQL |
lnc-TSPY10-10:1 | OV | 13 | 0.534938 | coding | 87 | chrY | 10088025 | 10089586 | + | 0.9964 | lnc-TSPY10-10 | 0.905 | 0 | 0 | 0 | 3 | noncoding | -0.349635454 | LGSPLALCLAVEK | n[145]LGSPLALCLAVEK | LGSPLALCLAVEKLFWIPHCPSCKAPSCLTHPEPPGLPESNSWPSPAGPFSHNAHSIVACPKEDLAHGQQSRKALLCPALALEPRQL |
lnc-TSPY10-12:1 | HCC | 11 | 0.559964 | coding | 46 | chrY | 10173852 | 10174207 | + | 0.8957 | lnc-TSPY10-12 | 1 | 0 | 0 | 0 | 7 | noncoding | -0.345169516 | LAHIYIGHTLR | LAHIYIGHTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTRICG | |
lnc-TSPY10-12:1 | HCC | 11 | 0.559964 | coding | 46 | chrY | 10173852 | 10174207 | + | 0.8957 | lnc-TSPY10-12 | 1 | 0 | 0 | 0 | 7 | noncoding | -0.345169516 | LAHIYIGHTLR | n[43]LAHIYIGHTLR | LAHIYIGHTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTRICG |
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