top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSPAN9-1:4 | OV | 11 | 0.313059 | noncoding | 76 | chr12 | 3300362 | 3345052 | + | 0.3042 | lnc-TSPAN9-1 | 0.27 | 0 | 0 | 0 | 1 | noncoding | -0.301651945 | MVVGGSGEGKR | n[145]MVVGGSGEGKR | MVVGGSGEGKRCWLKGIKFQLDRRNKLKRSIACRDSVWLITLYFFFYTLSSRVHVHNVQVCYIRIHVPCWCAAPTN |
lnc-TSPAN9-1:4 | OV | 10 | 0.313059 | noncoding | 50 | chr12 | 3300362 | 3345052 | + | 0.8421 | lnc-TSPAN9-1 | 0.028 | -4.06 | -5.112 | -4.501 | 1 | noncoding | -0.301651945 | SAGLHASPGR | n[145]SAGLHASPGR | LSKGRKTAHCWNGSPEGATGGRKSAGLHASPGRALDWVCDCGQTVGLSKP |
lnc-TSPAN9-1:4 | OV | 10 | 0.313059 | noncoding | 76 | chr12 | 3300362 | 3345052 | + | 0.962 | lnc-TSPAN9-1 | 0.27 | 0 | 0 | 0 | 1 | noncoding | -0.301651945 | VVGGSGEGKR | n[145]VVGGSGEGKR | MVVGGSGEGKRCWLKGIKFQLDRRNKLKRSIACRDSVWLITLYFFFYTLSSRVHVHNVQVCYIRIHVPCWCAAPTN |
lnc-TSPAN9-1:5 | CRC | 17 | 0.315269 | noncoding | 48 | chr12 | 3300362 | 3345052 | + | 0.6753 | lnc-TSPAN9-1 | 0.138 | -4.572 | -4.891 | -4.526 | 1 | noncoding | -0.295634784 | DWTLGVSVWEGTFSCWK | DWTLGVSVWEGTFSCWK | LCCASYLGRLRQEDRDWTLGVSVWEGTFSCWKGSSLANAPSWGILVSS |
lnc-TSPAN9-1:5 | HCC | 8 | 0.315269 | noncoding | 132 | chr12 | 3300362 | 3345052 | + | 0.9219 | lnc-TSPAN9-1 | 0.385 | 0 | 0 | 0 | 3 | noncoding | -0.295634784 | EGAEEEER | n[230]EGAEEEER | LEGAGRETGRERMKERERRTRGKKRRRRRRRKRRQRKREKEERKEKGREKGKERREKKEGAEEEEREEERQMRGSYYCSCRGWPPGLCPKILENTRLASSHPLSGCPMASAASHSRTGALLPCWGPHWEIGW |
Page 1 of 1
bottom of page