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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSPAN33-4:2 | EOGC | 30 | 0.692011 | coding | 140 | chr7 | 129056018 | 129056770 | + | 0.3132 | lnc-TSPAN33-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.719583064 | ELASQPDVAAFLMSGVSLKPEFVDIINAKQ | n[145]ELASQPDVAAFLMSGVSLKPEFVDIINAKQ | LGRKVAHALAERLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVILAYDPVWATGTGKTATPQQAQEVHKKLRGWLKSNISDAVAQSTGIIYGGSVTKATCKELASQPDVAAFLMSGVSLKPEFVDIINAKQ |
lnc-TSPAN33-4:2 | HCC | 29 | 0.692011 | coding | 140 | chr7 | 129056018 | 129056770 | + | 0.5309 | lnc-TSPAN33-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.719583064 | ELASQPDVAAFLMSGVSLKPEFVDIINAK | n[230]ELASQPDVAAFLMSGVSLKPEFVDIINAK | LGRKVAHALAERLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVILAYDPVWATGTGKTATPQQAQEVHKKLRGWLKSNISDAVAQSTGIIYGGSVTKATCKELASQPDVAAFLMSGVSLKPEFVDIINAKQ |
lnc-TSPAN33-4:2 | HCC | 30 | 0.692011 | coding | 140 | chr7 | 129056018 | 129056770 | + | 0.7117 | lnc-TSPAN33-4 | 1 | 0 | 0 | 0 | 2 | coding | 0.719583064 | ELASQPDVAAFLMSGVSLKPEFVDIINAKQ | n[230]ELASQPDVAAFLMSGVSLKPEFVDIINAKQ | LGRKVAHALAERLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVILAYDPVWATGTGKTATPQQAQEVHKKLRGWLKSNISDAVAQSTGIIYGGSVTKATCKELASQPDVAAFLMSGVSLKPEFVDIINAKQ |
lnc-TSPAN33-4:2 | OV | 10 | 0.692011 | coding | 107 | chr7 | 129056018 | 129056770 | + | 0.7349 | lnc-TSPAN33-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.719583064 | IAVAPQNCYK | n[145]IAVAPQNCYK | MAPSRKFFVGRNWKMNGRKKCLGELIGTQNAATVPADTKVICALATAYNELARQKLAPKIAVAPQNCYKVTNGAFTGEISPGMVKDLGVTWVVWSWGTQKACLWGVR |
lnc-TSPAN33-4:2 | OV | 16 | 0.692011 | coding | 107 | chr7 | 129056018 | 129056770 | + | 0.4803 | lnc-TSPAN33-4 | 1 | 0 | 0 | 0 | 2 | coding | 0.719583064 | VTNGAFTGEISPGMVK | n[145]VTNGAFTGEISPGM[147]VK | MAPSRKFFVGRNWKMNGRKKCLGELIGTQNAATVPADTKVICALATAYNELARQKLAPKIAVAPQNCYKVTNGAFTGEISPGMVKDLGVTWVVWSWGTQKACLWGVR |
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