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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSTD2-4:1 | OSCC | 8 | 0.0487369 | noncoding | 68 | chr9 | 97390838 | 97396691 | - | 0.8618 | lnc-TSTD2-4 | 0.69 | 0 | 0 | 0 | 4 | noncoding | -0.355244803 | TTCIQMGR | n[145]TTCIQM[147]GR | LPLGKTTCIQMGRQTRWLIKKETDAIWGGTGISHFLVLGVSEEGLSENATLLCLPILGPGSSCAGCPQ |
lnc-TSTD2-4:1 | OSCC | 8 | 0.0487369 | noncoding | 68 | chr9 | 97390838 | 97396691 | - | 0.8618 | lnc-TSTD2-4 | 0.69 | 0 | 0 | 0 | 4 | noncoding | -0.355244803 | TTCIQMGR | n[145]TTCIQMGR | LPLGKTTCIQMGRQTRWLIKKETDAIWGGTGISHFLVLGVSEEGLSENATLLCLPILGPGSSCAGCPQ |
lnc-TTC21A-76:3 | CCRC | 9 | 0.225471 | noncoding | 107 | chr3 | 39152905 | 39154723 | + | 0.9977 | lnc-TTC21A-76 | 1 | 0 | -1.634 | 0 | 2 | noncoding | -0.246883696 | GSLFYSNLK | n[230]GSLFYSNLK | MGRPRPGAPRNSARPRARQWQSRRLLYALHPHPSRGSLFYSNLKVPPSAPNLPPTPRSAGKVNCGWRGIWGVWGAGRQGAGRMDVISGPELHSCPRAKRPFPAEVPN |
lnc-TTC21A-76:3 | CCRC | 14 | 0.225471 | noncoding | 107 | chr3 | 39152905 | 39154723 | + | 0.0639 | lnc-TTC21A-76 | 1 | 0 | -1.634 | 0 | 1 | noncoding | -0.246883696 | MDVISGPELHSCPR | MDVISGPELHSCPR | MGRPRPGAPRNSARPRARQWQSRRLLYALHPHPSRGSLFYSNLKVPPSAPNLPPTPRSAGKVNCGWRGIWGVWGAGRQGAGRMDVISGPELHSCPRAKRPFPAEVPN |
lnc-TTC23-2:4 | BRCA-HER2-enriched | 7 | 0.298305 | noncoding | 51 | chr15 | 99391621 | 99403713 | - | 0.9991 | lnc-TTC23-2 | 0.075 | -5.357 | -5.424 | -5.836 | 158 | noncoding | -0.317496741 | LGGELLK | n[145]LGGELLK | LGGELLKALYKCDGPGVIFQFLVLPVWVGSLPSFQSCLDFVSFIQRNQDIT |
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