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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSSK4-3:2 | BRCA-Luminal A | 14 | 0.107547 | noncoding | 72 | chr14 | 24195726 | 24203700 | + | 0.9983 | lnc-TSSK4-3 | 0.967 | 0 | 0 | 0 | 20 | noncoding | -0.290602397 | WEFIACLWHNLFLK | n[145]WEFIACLWHNLFLK | LASNRTLEPSCQQGQTVNKWEFIACLWHNLFLKYSVLEDGRYENLDSSLVLFSAPLSPTDIVWIVIPAQISC |
lnc-TSSK4-3:2 | OSCC | 11 | 0.107547 | noncoding | 60 | chr14 | 24195726 | 24203700 | + | 0.9627 | lnc-TSSK4-3 | 1 | -4.801 | -4.627 | -5.052 | 21 | noncoding | -0.290602397 | SSINIQVPITK | n[145]SSINIQVPITK | LRMFLMPLSHCFIAAAKQNPKSSINIQVPITKMLKESQHYMCLWTSCSPTSVGPSMLLIF |
lnc-TSSK6-3:1 | BRCA-Luminal A | 8 | 0.939869 | coding | 35 | chr19 | 19533698 | 19536333 | - | 0.9999 | lnc-TSSK6-3 | 1 | -3.253 | -2.145 | -0.463 | 45 | noncoding | -0.303854409 | LCQVGAGK | n[145]LCQVGAGK | LEMQRPGLRLCQVGAGKTCIQPLPVARSAVCLFSA |
lnc-TSSK6-3:1 | BRCA-Luminal B | 8 | 0.939869 | coding | 35 | chr19 | 19533698 | 19536333 | - | 0.9999 | lnc-TSSK6-3 | 1 | -3.253 | -2.145 | -0.463 | 45 | noncoding | -0.303854409 | LCQVGAGK | n[145]LCQVGAGK | LEMQRPGLRLCQVGAGKTCIQPLPVARSAVCLFSA |
lnc-TSSK6-3:1 | BRCA-HER2-enriched | 8 | 0.939869 | coding | 35 | chr19 | 19533698 | 19536333 | - | 0.9999 | lnc-TSSK6-3 | 1 | -3.253 | -2.145 | -0.463 | 45 | noncoding | -0.303854409 | LCQVGAGK | n[145]LCQVGAGK | LEMQRPGLRLCQVGAGKTCIQPLPVARSAVCLFSA |
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