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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSSC4-2:1 | BRCA-Luminal A | 13 | 0.00981763 | noncoding | 75 | chr11 | 2376180 | 2376970 | + | 0.9996 | lnc-TSSC4-2 | 0.19 | -4.362 | 0 | 0 | 1 | noncoding | -0.384039125 | GSQVPAPESNVSK | n[145]GSQVPAPESNVSK | LGWTTLAKTSWLEDGSPDLVPRGSQVPAPESNVSKACCLCKANHCGINSFRKPSRIVQGAHLLWGALPDCPRCLR |
lnc-TSSC4-2:2 | OV | 8 | 0.00907934 | noncoding | 116 | chr11 | 2376199 | 2377189 | + | 0.8868 | lnc-TSSC4-2 | 0.19 | -3.763 | 0 | 0 | 1 | noncoding | -0.358168368 | SATAAWGR | n[145]SATAAWGR | LQKVLSASTGLDDTCQDELARGWFSGPGPTWFPGSSPGEQCEQSLLSLQSQPLWHQLLQEALPDCPRRGPAATPLGARSATAAWGRLPRPARCTWALRSWPKRAKLGVGAATPYPS |
lnc-TSSK2-4:1 | CCRC | 11 | 0.0717439 | noncoding | 94 | chr22 | 19055800 | 19056512 | + | 0.8723 | lnc-TSSK2-4 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.291679169 | TVGVDPAADGK | n[230]TVGVDPAADGK | LIHCRTVGVDPAADGKGVVVVMEWRSGQQKPATSYRTTVNKNACTMLGNITHMIRKNKASPQPAHSCHPRASAILRSQKPVMVKRKGTCPTKSS |
lnc-TSSK2-4:1 | EOGC | 16 | 0.0717439 | noncoding | 94 | chr22 | 19055800 | 19056512 | + | 0.8151 | lnc-TSSK2-4 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.291679169 | LIHCRTVGVDPAADGK | n[145]LIHCRTVGVDPAADGK | LIHCRTVGVDPAADGKGVVVVMEWRSGQQKPATSYRTTVNKNACTMLGNITHMIRKNKASPQPAHSCHPRASAILRSQKPVMVKRKGTCPTKSS |
lnc-TSSK2-4:1 | EOGC | 20 | 0.0717439 | noncoding | 94 | chr22 | 19055800 | 19056512 | + | 0.7081 | lnc-TSSK2-4 | 1 | 0 | 0 | 0 | 11 | noncoding | -0.291679169 | TVGVDPAADGKGVVVVMEWR | n[145]TVGVDPAADGKGVVVVM[147]EWR | LIHCRTVGVDPAADGKGVVVVMEWRSGQQKPATSYRTTVNKNACTMLGNITHMIRKNKASPQPAHSCHPRASAILRSQKPVMVKRKGTCPTKSS |
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