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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TUBA3D-1:2 | EOGC | 25 | 0.949307 | coding | 103 | chr2 | 131493075 | 131516358 | + | 0.7044 | lnc-TUBA3D-1 | 1 | -4.521 | 10.859 | 11.606 | 10 | coding | 0.70032582 | SGGQTLLQVFVEMWLHHYSLEMYQK | n[145]SGGQTLLQVFVEMWLHHYSLEMYQK | MQTPPPTRSGGQTLLQVFVEMWLHHYSLEMYQKMQSPHAKESFTPTEEHVLVVRLLLKHLHAFANSLKPEQASPSAHSHATSPLEEFKRAAVPRFIQQKLYLF |
lnc-TUBA3D-1:2 | OV | 10 | 0.949307 | coding | 103 | chr2 | 131493075 | 131516358 | + | 0.8256 | lnc-TUBA3D-1 | 1 | -4.521 | 10.859 | 11.606 | 4 | coding | 0.70032582 | AAVPRFIQQK | n[145]AAVPRFIQQK | MQTPPPTRSGGQTLLQVFVEMWLHHYSLEMYQKMQSPHAKESFTPTEEHVLVVRLLLKHLHAFANSLKPEQASPSAHSHATSPLEEFKRAAVPRFIQQKLYLF |
lnc-TUBAL3-1:1 | BRCA-Luminal A | 19 | 0.076209 | noncoding | 44 | chr10 | 5304430 | 5304865 | - | 0.915 | lnc-TUBAL3-1 | 1 | 0 | 0 | 0 | 3 | noncoding | -0.322743324 | HFNAPSHIHRTVMSSPLSK | n[145]HFNAPSHIHRTVM[147]SSPLSK | MKFNPFVTSDRSSNCKRHFNAPSHIHRTVMSSPLSKELRQKYNV |
lnc-TTC23-2:4 | LUAD | 7 | 0.298305 | noncoding | 51 | chr15 | 99391621 | 99403713 | - | 0.9956 | lnc-TTC23-2 | 1 | -1.055 | -1.592 | 1.116 | 7 | noncoding | -0.317496741 | KDMGLGK | KDM[147]GLGK | MRSRKDMGLGKTVPKESGVRRQLLEVATGTGKNQVISCFLLIFVTSDDSAL |
lnc-TTC23-2:4 | LUAD | 7 | 0.298305 | noncoding | 51 | chr15 | 99391621 | 99403713 | - | 0.9992 | lnc-TTC23-2 | 0.075 | -5.357 | -5.424 | -5.836 | 93 | noncoding | -0.317496741 | LGGELLK | n[230]LGGELLK | LGGELLKALYKCDGPGVIFQFLVLPVWVGSLPSFQSCLDFVSFIQRNQDIT |
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