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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TUSC3-5:1 | OV | 12 | 0.0827108 | noncoding | 92 | chr8 | 16374617 | 16375082 | + | 0.0595 | lnc-TUSC3-5 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.334584969 | NVEDFLSPLLAK | n[145]NVEDFLSPLLAK | MNIISVLVTGSLSKTPIQPALLSAALSDIQHPCLQPVGSAEDHIWAPQKNVEDFLSPLLAKTCITQAKELTGTLQVKGYFDQQRKAWLLKKG |
lnc-TVP23A-5:1 | OV | 24 | 0.028043 | noncoding | 47 | chr16 | 10846356 | 10846908 | - | 0.9434 | lnc-TVP23A-5 | 0.039 | 0 | 0 | 0 | 3 | noncoding | -0.409964825 | LECSGMIIAHHSLELLGSIDPAAS | n[145]LECSGM[147]IIAHHSLELLGSIDPAAS | LACKMKYFYLFIYSEQGLTLSTRLECSGMIIAHHSLELLGSIDPAAS |
lnc-TWIST1-5:1 | BRCA-HER2-enriched | 9 | 0.0433502 | noncoding | 93 | chr7 | 18948897 | 18949762 | - | 0.9749 | lnc-TWIST1-5 | 1 | 0 | 0 | 0 | 7 | noncoding | -0.329483069 | GPSSVENIK | n[145]GPSSVENIK | LHKNQTRLKKTQNHQHQDPKGQESFKKQKKNPPKTLKGPSSVENIKAKMQASTQKGGSLPKLETNFINYVKNCFLMTDQEAIQDLWQWSKKSP |
lnc-TWIST1-5:1 | BRCA-Luminal A | 9 | 0.0433502 | noncoding | 93 | chr7 | 18948897 | 18949762 | - | 0.9749 | lnc-TWIST1-5 | 1 | 0 | 0 | 0 | 7 | noncoding | -0.329483069 | GPSSVENIK | n[145]GPSSVENIK | LHKNQTRLKKTQNHQHQDPKGQESFKKQKKNPPKTLKGPSSVENIKAKMQASTQKGGSLPKLETNFINYVKNCFLMTDQEAIQDLWQWSKKSP |
lnc-TWIST1-5:1 | BRCA-Basal-like | 9 | 0.0433502 | noncoding | 93 | chr7 | 18948897 | 18949762 | - | 0.9749 | lnc-TWIST1-5 | 1 | 0 | 0 | 0 | 7 | noncoding | -0.329483069 | GPSSVENIK | n[145]GPSSVENIK | LHKNQTRLKKTQNHQHQDPKGQESFKKQKKNPPKTLKGPSSVENIKAKMQASTQKGGSLPKLETNFINYVKNCFLMTDQEAIQDLWQWSKKSP |
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