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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-UBE2E2-4:1 | CCRC | 15 | 0.303482 | noncoding | 65 | chr3 | 22989822 | 22991582 | + | 0.993 | lnc-UBE2E2-4 | 1 | 0 | 0 | 0 | 12 | noncoding | -0.286919771 | SLLYAAFMGEPLPPK | n[230]SLLYAAFMGEPLPPK | LARQLDHQHHPQASPLLVQPCWEAQPMGVWEERTASAPQIHEQVHTARSLLYAAFMGEPLPPKAP |
lnc-UBE2E3-6:1 | OV | 12 | 0.0445302 | noncoding | 44 | chr2 | 180364375 | 180372798 | + | 0.9309 | lnc-UBE2E3-6 | 0.255 | -6.004 | -4.573 | -5.562 | 2 | noncoding | -0.362602496 | LIDCYNMSHSNK | n[145]LIDCYNMSHSNK | LIDCYNMSHSNKITLSKGRKCYRGMRTENIIGHLLGSHDMIKFI |
lnc-UBE2E3-6:1 | OV | 12 | 0.0445302 | noncoding | 44 | chr2 | 180364375 | 180372798 | + | 0.9309 | lnc-UBE2E3-6 | 0.255 | -6.004 | -4.573 | -5.562 | 2 | noncoding | -0.362602496 | LIDCYNMSHSNK | n[145]LIDCYNM[147]SHSNK | LIDCYNMSHSNKITLSKGRKCYRGMRTENIIGHLLGSHDMIKFI |
lnc-UBE2H-2:8 | BRCA-HER2-enriched | 17 | 0.132322 | noncoding | 126 | chr7 | 129548103 | 129611654 | - | 0.0642 | lnc-UBE2H-2 | 0.342 | 0 | 0 | 0 | 1 | coding | 0.651263767 | LLGSRDLPNLASQSAIK | n[145]LLGSRDLPNLASQSAIK | LECNGVISAHCNLRLPGSSDSPTSASQVTGTTGTCHHTQLLSVFIVEMGFRHVGQTDLELLTSGDPPASAPQSAGVTGTSHRAWPFFFFFCIFLVETVFHCVVHVSLKLLGSRDLPNLASQSAIKA |
lnc-UBE2H-2:8 | OV | 15 | 0.132322 | noncoding | 37 | chr7 | 129548103 | 129611654 | - | 0.8503 | lnc-UBE2H-2 | 0.045 | 0 | 0 | 0 | 9 | coding | 0.651263767 | ITATSTSWAQAILMP | n[145]ITATSTSWAQAILM[147]P | LFCFFETVLLCRPGWSVVVQSRITATSTSWAQAILMP |
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