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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-UBXN4-12:1 | EOGC | 19 | 0.0231651 | noncoding | 127 | chr2 | 136118592 | 136119848 | + | 0.9985 | lnc-UBXN4-12 | 1 | -1.823 | -1.172 | -2.501 | 14 | noncoding | -0.388758919 | ETASAGGVAAAEIAGTEAR | n[145]ETASAGGVAAAEIAGTEAR | LAEVCSGRADSAFPLAPLPSGAETGWGGGASVGRGRETASAGGVAAAEIAGTEARASRHGPQRPPPRNGPEERDCPDCTLHTIPLFYIKRGNISVWSVPEVVRRQGTFSLQSMTFPLCLGPLPNVGG |
lnc-UBXN4-12:1 | EOGC | 13 | 0.0231651 | noncoding | 127 | chr2 | 136118592 | 136119848 | + | 0.6297 | lnc-UBXN4-12 | 1 | -1.823 | -1.172 | -2.501 | 1 | noncoding | -0.388758919 | GNISVWSVPEVVR | n[145]GNISVWSVPEVVR | LAEVCSGRADSAFPLAPLPSGAETGWGGGASVGRGRETASAGGVAAAEIAGTEARASRHGPQRPPPRNGPEERDCPDCTLHTIPLFYIKRGNISVWSVPEVVRRQGTFSLQSMTFPLCLGPLPNVGG |
lnc-UBXN4-13:1 | BRCA-Luminal A | 8 | 0.469439 | noncoding | 142 | chr2 | 136230752 | 136233245 | + | 0.4753 | lnc-UBXN4-13 | 1 | -0.728 | -5.075 | -4.139 | 1 | noncoding | -0.419133234 | GQSSGGGK | n[145]GQSSGGGK | MGMQLPWLHGMLTRVRAEDQGAWGWYLLEFFSLTDQSSLDEMEKGQSSGGGKYSWVRRSFIDNLRNSNSSGIQYVGEAKEDIGNVCRKPHARIFTVALLVITKTLELTQMSIKQRLDKCTGVNLLNGIIDSNESGINKSYMY |
lnc-UBXN4-13:1 | EOGC | 14 | 0.469439 | noncoding | 142 | chr2 | 136230752 | 136233245 | + | 0.9465 | lnc-UBXN4-13 | 1 | -0.728 | -5.075 | -4.139 | 3 | noncoding | -0.419133234 | NSNSSGIQYVGEAK | n[145]NSNSSGIQYVGEAK | MGMQLPWLHGMLTRVRAEDQGAWGWYLLEFFSLTDQSSLDEMEKGQSSGGGKYSWVRRSFIDNLRNSNSSGIQYVGEAKEDIGNVCRKPHARIFTVALLVITKTLELTQMSIKQRLDKCTGVNLLNGIIDSNESGINKSYMY |
lnc-UBXN4-14:1 | OV | 16 | 0.0175894 | noncoding | 52 | chr2 | 136239245 | 136240669 | + | 0.7287 | lnc-UBXN4-14 | 0.9 | -5.327 | -6 | -4.658 | 1 | noncoding | -0.366875712 | TFMISLTQLPGLSFSR | n[145]TFM[147]ISLTQLPGLSFSR | LTFAGRGQSPKTFISMSRTFMISLTQLPGLSFSRLSLYFSQSRGMDLRNCLR |
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