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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-UBR2-4:1 | OV | 15 | 0.229901 | noncoding | 71 | chr6 | 42759502 | 42810401 | + | 0.0958 | lnc-UBR2-4 | 0.234 | -3.593 | -3.095 | -4.489 | 1 | coding | 0.718660337 | DTWPATKGGAASLAR | n[145]DTWPATKGGAASLAR | LVGCCSLWRDTWPATKGGAASLARLARHPALPSLNRIAYSVLRLPELFTDTWGLLGPSFSPSLPRATPSLQ |
lnc-UBR2-4:1 | OV | 8 | 0.229901 | noncoding | 71 | chr6 | 42759502 | 42810401 | + | 0.8714 | lnc-UBR2-4 | 0.234 | -3.593 | -3.095 | -4.489 | 2 | coding | 0.718660337 | GGAASLAR | n[145]GGAASLAR | LVGCCSLWRDTWPATKGGAASLARLARHPALPSLNRIAYSVLRLPELFTDTWGLLGPSFSPSLPRATPSLQ |
lnc-UBTF-1:1 | BRCA-Luminal A | 24 | 0.208545 | noncoding | 113 | chr17 | 44228759 | 44230228 | - | 0.8599 | lnc-UBTF-1 | 1 | 0 | 0 | 0 | 4 | noncoding | -0.300218926 | LGASPSPVVSMAEQLQGEPWFHGK | n[145]LGASPSPVVSMAEQLQGEPWFHGK | LGASPSPVVSMAEQLQGEPWFHGKLSQREAEALLQLHGDFLVRESMTKASMCLLACRVGCLSTCYWWTLKDWFGQRITALRVSIPALWETKPGRSQGQEIETILANTVKPGLY |
lnc-UBTF-1:1 | BRCA-Basal-like | 24 | 0.208545 | noncoding | 113 | chr17 | 44228759 | 44230228 | - | 0.8599 | lnc-UBTF-1 | 1 | 0 | 0 | 0 | 4 | noncoding | -0.300218926 | LGASPSPVVSMAEQLQGEPWFHGK | n[145]LGASPSPVVSMAEQLQGEPWFHGK | LGASPSPVVSMAEQLQGEPWFHGKLSQREAEALLQLHGDFLVRESMTKASMCLLACRVGCLSTCYWWTLKDWFGQRITALRVSIPALWETKPGRSQGQEIETILANTVKPGLY |
lnc-UBTF-1:1 | BRCA-Luminal B | 24 | 0.208545 | noncoding | 113 | chr17 | 44228759 | 44230228 | - | 0.8599 | lnc-UBTF-1 | 1 | 0 | 0 | 0 | 4 | noncoding | -0.300218926 | LGASPSPVVSMAEQLQGEPWFHGK | n[145]LGASPSPVVSMAEQLQGEPWFHGK | LGASPSPVVSMAEQLQGEPWFHGKLSQREAEALLQLHGDFLVRESMTKASMCLLACRVGCLSTCYWWTLKDWFGQRITALRVSIPALWETKPGRSQGQEIETILANTVKPGLY |
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