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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-URGCP-2:3 | BRCA-Luminal B | 14 | 0.518991 | coding | 67 | chr7 | 43940894 | 44019149 | - | 0.9683 | lnc-URGCP-2 | 0.927 | -4.021 | 0 | -4.003 | 8 | coding | 0.765268727 | LQIITTMVADLASK | n[145]LQIITTMVADLASK | LVWYHHGQQHHLRPGRRDVQGLAPQETSRQTEAAEREIPVSPGRLQIITTMVADLASKRWHCQSRNC |
lnc-URGCP-2:3 | BRCA-Luminal A | 14 | 0.518991 | coding | 67 | chr7 | 43940894 | 44019149 | - | 0.9683 | lnc-URGCP-2 | 0.927 | -4.021 | 0 | -4.003 | 8 | coding | 0.765268727 | LQIITTMVADLASK | n[145]LQIITTMVADLASK | LVWYHHGQQHHLRPGRRDVQGLAPQETSRQTEAAEREIPVSPGRLQIITTMVADLASKRWHCQSRNC |
lnc-UGGT1-8:1 | OSCC | 19 | 0.0436022 | noncoding | 125 | chr2 | 128027576 | 128029675 | + | 0.6655 | lnc-UGGT1-8 | 0.837 | 0 | 0 | 0 | 1 | noncoding | -0.248125168 | LSPASTPMSSSIIPPLSHK | n[145]LSPASTPM[147]SSSIIPPLSHK | LLPKSCQHLLNFKPIGPHLDLILFSLLTSSNSSSCLPLASRTRLSPASTPMSSSIIPPLSHKYSILQGSNTLMLYCLPKWFNVFPQFQMSSFLFFVFLRQVLSSAQAEVQWRDHSSLQPRLPCLN |
lnc-UGT1A8-3:1 | CCRC | 13 | 0.485364 | noncoding | 107 | chr2 | 233585438 | 233586291 | + | 0.7947 | lnc-UGT1A8-3 | 1 | 10.911 | -2.314 | -3.067 | 3 | coding | 0.613597766 | LDPLAMCGLIVAK | n[272]LDPLAM[147]CGLIVAK | LDPLAMCGLIVAKYFSLPSVVFTRGILCHYLEEGAQSPASLSYSPRYVSGFSHAMTFKERVWNHIFFLKEHLFCPYFFKNALKVASEVLQAPVMAYDLYSHTSIWLL |
lnc-UGT2A3-5:1 | EOGC | 7 | 0.0191939 | noncoding | 53 | chr4 | 68900650 | 68900910 | - | 0.9973 | lnc-UGT2A3-5 | 1 | -4.512 | -3.444 | -5.671 | 54 | noncoding | -0.362322141 | LKPLDQK | n[145]LKPLDQK | LKPLDQKLFWIEFVMHHNGAKYLLPPAHKLTWFQYCSLDVLACTALVTLFVIL |
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