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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-USP14-2:1 | OV | 13 | 0.240141 | noncoding | 176 | chr18 | 109064 | 122217 | + | 0.9988 | lnc-USP14-2 | 1 | 10.662 | 9.071 | 10.673 | 3 | noncoding | -0.433347206 | KDVEMEPVQEAEK | n[145]KDVEMEPVQEAEK | LCSAYRVHCDISLHRSPSKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECRKDVEMEPVQEAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP |
lnc-USP16-14:4 | HCC | 11 | 0.083973 | noncoding | 52 | chr21 | 28885412 | 28918923 | + | 0.9972 | lnc-USP16-14 | 0.342 | 0 | 0 | 0 | 25 | coding | 0.605597537 | IDGTASAEQMK | n[230]IDGTASAEQMK | MSHFSEHISIIKQHMPGIIMNRYNNCKKSCKIDGTASAEQMKRINEWFLCKR |
lnc-USP16-14:4 | HCC | 11 | 0.083973 | noncoding | 52 | chr21 | 28885412 | 28918923 | + | 0.9972 | lnc-USP16-14 | 0.342 | 0 | 0 | 0 | 25 | coding | 0.605597537 | IDGTASAEQMK | n[230]IDGTASAEQM[147]K | MSHFSEHISIIKQHMPGIIMNRYNNCKKSCKIDGTASAEQMKRINEWFLCKR |
lnc-USP16-14:4 | HCC | 10 | 0.083973 | noncoding | 52 | chr21 | 28885412 | 28918923 | + | 0.3707 | lnc-USP16-14 | 0.342 | 0 | 0 | 0 | 3 | coding | 0.605597537 | QHMPGIIMNR | n[230]QHM[147]PGIIMNR | MSHFSEHISIIKQHMPGIIMNRYNNCKKSCKIDGTASAEQMKRINEWFLCKR |
lnc-USP16-14:4 | OV | 11 | 0.083973 | noncoding | 52 | chr21 | 28885412 | 28918923 | + | 0.9308 | lnc-USP16-14 | 0.342 | 0 | 0 | 0 | 16 | coding | 0.605597537 | IDGTASAEQMK | n[145]IDGTASAEQM[147]K | MSHFSEHISIIKQHMPGIIMNRYNNCKKSCKIDGTASAEQMKRINEWFLCKR |
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