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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-USP53-6:1 | BRCA-HER2-enriched | 8 | 0.0809406 | noncoding | 46 | chr4 | 120066859 | 120070468 | + | 0.9969 | lnc-USP53-6 | 0.224 | -3.655 | -4.195 | -3.437 | 4 | noncoding | -0.365358634 | VPMSFHIK | n[145]VPMSFHIK | MVPMSFHIKTPSLSKEFYVKTQHFRKGFLEFHDDVLFKLPEATHNC |
lnc-URGCP-2:3 | OV | 14 | 0.518991 | coding | 67 | chr7 | 43940894 | 44019149 | - | 0.5078 | lnc-URGCP-2 | 0.927 | -4.021 | 0 | -4.003 | 1 | coding | 0.765268727 | LQIITTMVADLASK | n[145]LQIITTMVADLASK | LVWYHHGQQHHLRPGRRDVQGLAPQETSRQTEAAEREIPVSPGRLQIITTMVADLASKRWHCQSRNC |
lnc-URGCP-MRPS24-2:1 | OV | 13 | 0.0759422 | noncoding | 48 | chr7 | 43624364 | 43627639 | - | 0.3767 | lnc-URGCP-MRPS24-2 | 0.999 | -4.152 | -4.33 | -5.766 | 1 | noncoding | -0.386657966 | HPMTQYLSTTAAK | n[145]HPM[147]TQYLSTTAAK | MPCFYLINQKMPIHLYKYILKGLLKKHPMTQYLSTTAAKDTQQTEVAS |
lnc-URGCP-MRPS24-2:1 | OV | 10 | 0.0759422 | noncoding | 48 | chr7 | 43624364 | 43627639 | - | 0.8478 | lnc-URGCP-MRPS24-2 | 0.999 | -4.152 | -4.33 | -5.766 | 2 | noncoding | -0.386657966 | MPCFYLINQK | n[145]MPCFYLINQK | MPCFYLINQKMPIHLYKYILKGLLKKHPMTQYLSTTAAKDTQQTEVAS |
lnc-URM1-1:4 | PRAD | 7 | 0.127719 | noncoding | 56 | chr9 | 128392009 | 128394226 | + | 0.9985 | lnc-URM1-1 | 1 | -2.389 | -1.774 | -2.663 | 1 | noncoding | -0.294036985 | DWSPAEK | LKDPAGRDWSPAEKEEGRGCGWRRWWQGPASLCARAGTAILALGPASRRPERSRPR |
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