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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VPREB1-27:1 | BRCA-HER2-enriched | 16 | 0.398415 | noncoding | 102 | chr22 | 22404206 | 22404721 | + | 0.9989 | lnc-VPREB1-27 | 1 | -3.603 | -0.896 | 4.427 | 6 | noncoding | -0.335322553 | LLIYENNKRPSGIPDR | n[145]LLIYENNKRPSGIPDR | MTCSPLLLTLLIHCTGSWAQSVLTQPPSVSAAPGQKVTISCSGSSSDMGNYAVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLWPED |
lnc-VPREB1-27:1 | BRCA-Luminal A | 16 | 0.398415 | noncoding | 102 | chr22 | 22404206 | 22404721 | + | 0.9989 | lnc-VPREB1-27 | 1 | -3.603 | -0.896 | 4.427 | 6 | noncoding | -0.335322553 | LLIYENNKRPSGIPDR | n[145]LLIYENNKRPSGIPDR | MTCSPLLLTLLIHCTGSWAQSVLTQPPSVSAAPGQKVTISCSGSSSDMGNYAVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLWPED |
lnc-VPREB1-27:1 | BRCA-Luminal B | 16 | 0.398415 | noncoding | 102 | chr22 | 22404206 | 22404721 | + | 0.9989 | lnc-VPREB1-27 | 1 | -3.603 | -0.896 | 4.427 | 6 | noncoding | -0.335322553 | LLIYENNKRPSGIPDR | n[145]LLIYENNKRPSGIPDR | MTCSPLLLTLLIHCTGSWAQSVLTQPPSVSAAPGQKVTISCSGSSSDMGNYAVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLWPED |
lnc-VPREB1-27:1 | BRCA-HER2-enriched | 21 | 0.398415 | noncoding | 102 | chr22 | 22404206 | 22404721 | + | 0.6186 | lnc-VPREB1-27 | 1 | -3.603 | -0.896 | 4.427 | 1 | noncoding | -0.335322553 | LLIYENNKRPSGIPDRFSGSK | n[145]LLIYENNKRPSGIPDRFSGSK | MTCSPLLLTLLIHCTGSWAQSVLTQPPSVSAAPGQKVTISCSGSSSDMGNYAVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLWPED |
lnc-VPREB1-27:1 | BRCA-Luminal B | 29 | 0.398415 | noncoding | 102 | chr22 | 22404206 | 22404721 | + | 0.9961 | lnc-VPREB1-27 | 1 | -3.603 | -0.896 | 4.427 | 1 | noncoding | -0.335322553 | VTISCSGSSSDMGNYAVSWYQQLPGTAPK | n[145]VTISCSGSSSDMGNYAVSWYQQLPGTAPK | MTCSPLLLTLLIHCTGSWAQSVLTQPPSVSAAPGQKVTISCSGSSSDMGNYAVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLWPED |
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