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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VKORC1L1-7:4 | OV | 17 | 0.0752879 | noncoding | 48 | chr7 | 65751104 | 65763674 | + | 0.9953 | lnc-VKORC1L1-7 | 1 | -4.768 | 10.221 | 5.006 | 15 | coding | 0.654707059 | AQLGVQAFADVLLVIPK | n[145]AQLGVQAFADVLLVIPK | LCGSGAGAVEVAMAEALNKYKLSVKGKAQLGVQAFADVLLVIPKVSPW |
lnc-VKORC1L1-7:4 | OV | 19 | 0.0752879 | noncoding | 48 | chr7 | 65751104 | 65763674 | + | 0.1449 | lnc-VKORC1L1-7 | 1 | -4.768 | 10.221 | 5.006 | 1 | coding | 0.654707059 | LCGSGAGAVEVAMAEALNK | n[145]LCGSGAGAVEVAM[147]AEALNK | LCGSGAGAVEVAMAEALNKYKLSVKGKAQLGVQAFADVLLVIPKVSPW |
lnc-VKORC1L1-7:4 | OV | 21 | 0.0752879 | noncoding | 48 | chr7 | 65751104 | 65763674 | + | 0.1327 | lnc-VKORC1L1-7 | 1 | -4.768 | 10.221 | 5.006 | 1 | coding | 0.654707059 | LCGSGAGAVEVAMAEALNKYK | n[145]LCGSGAGAVEVAM[147]AEALNKYK | LCGSGAGAVEVAMAEALNKYKLSVKGKAQLGVQAFADVLLVIPKVSPW |
lnc-VLDLR-4:1 | OSCC | 8 | 0.066768 | noncoding | 71 | chr9 | 2042993 | 2046019 | + | 0.9473 | lnc-VLDLR-4 | 0.994 | -4.843 | -4.229 | -5.299 | 17 | noncoding | -0.397873404 | KYLDEKTS | n[145]KYLDEKTS | MYLVLKLSREKYSKTSPDNLLQCIVTLRLNIYKLVSYIWMKGTLNVSYYKRYALHKGPFIQEKKYLDEKTS |
lnc-VMAC-1:1 | OV | 13 | 0.0438204 | noncoding | 72 | chr19 | 5899894 | 5901461 | + | 0.9927 | lnc-VMAC-1 | 0.186 | -4.216 | -3.642 | -4.007 | 6 | noncoding | -0.373056626 | DLMGTFLASETPR | n[145]DLMGTFLASETPR | LGGTSLHHPHMPAVLTKGPLAHGAHLTRSYPLGGPLQPFLLKTLDKDLMGTFLASETPRSRSADLDLQPSFK |
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