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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VPS50-1:9 | HCC | 9 | 0.18895 | noncoding | 46 | chr7 | 92836488 | 92949229 | + | 0.7709 | lnc-VPS50-1 | 0.489 | -4.844 | -4.45 | -3.646 | 1 | noncoding | -0.345154183 | LFCISLAIK | n[230]LFCISLAIK | LFCISLAIKYLWRSWYIFNVRLRIIQKSLYKMKQLVRKHKQANDCL |
lnc-VPS50-1:9 | OV | 19 | 0.18895 | noncoding | 166 | chr7 | 92836488 | 92949229 | + | 0.6185 | lnc-VPS50-1 | 0.157 | 0 | 0 | 0 | 1 | noncoding | -0.345154183 | VCDQVVLAACLSPCNPLHK | n[145]VCDQVVLAACLSPCNPLHK | LFFFFFFFLRWSLALSPRLECTLRLECSGTISAHCNLRLLGSSDSPASASLVAGITGTHHHTWLIFAFFVETGFHRVGQAGLKLLTSGDLPASASQSAGITGVSHRAQPTFLSRVCDQVVLAACLSPCNPLHKVPLAWKSVCLCISVVDLSIFIYLMISHLFSKRI |
lnc-VPS54-3:2 | CCRC | 11 | 0.0785496 | noncoding | 71 | chr2 | 64038581 | 64058989 | - | 0.9893 | lnc-VPS54-3 | 0.561 | -4.095 | -4.394 | -2.859 | 5 | noncoding | -0.374077625 | LSTGLGGHCRR | n[43]LSTGLGGHCRR | LSTGLGGHCRRKVLLSSLFPCDFPSLGVLGSQWVQESQKCSAAQGVSQATRKVVSCILTLTCRTSVNFFTI |
lnc-VPS54-3:2 | OV | 13 | 0.0785496 | noncoding | 59 | chr2 | 64038581 | 64058989 | - | 0.3076 | lnc-VPS54-3 | 0.965 | -4.885 | -5.362 | -4.39 | 1 | noncoding | -0.374077625 | FSDCIVNSQMLFK | n[145]FSDCIVNSQMLFK | LFDFLGDVINVLMLFFSAFKFSDCIVNSQMLFKNNFLQYPASSWFPLSSFLVRLLPLIL |
lnc-VPS54-3:2 | OV | 20 | 0.0785496 | noncoding | 59 | chr2 | 64038581 | 64058989 | - | 0.6825 | lnc-VPS54-3 | 0.965 | -4.885 | -5.362 | -4.39 | 2 | noncoding | -0.374077625 | LFDFLGDVINVLMLFFSAFK | n[145]LFDFLGDVINVLMLFFSAFK | LFDFLGDVINVLMLFFSAFKFSDCIVNSQMLFKNNFLQYPASSWFPLSSFLVRLLPLIL |
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