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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
lnc-VPREB1-27:1
OV
8
0.398415
noncoding
102
chr22
22404206
22404721
+
0.9996
lnc-VPREB1-27
1
-3.603
-0.896
4.427
16
noncoding
-0.335322553
LLIYENNK
n[145]LLIYENNK
MTCSPLLLTLLIHCTGSWAQSVLTQPPSVSAAPGQKVTISCSGSSSDMGNYAVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLWPED
lnc-VPREB1-27:1
OV
16
0.398415
noncoding
102
chr22
22404206
22404721
+
0.3153
lnc-VPREB1-27
1
-3.603
-0.896
4.427
2
noncoding
-0.335322553
LLIYENNKRPSGIPDR
n[145]LLIYENNKRPSGIPDR
MTCSPLLLTLLIHCTGSWAQSVLTQPPSVSAAPGQKVTISCSGSSSDMGNYAVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLWPED
lnc-VPREB1-27:1
PRAD
8
0.398415
noncoding
102
chr22
22404206
22404721
+
0.9935
lnc-VPREB1-27
1
-3.603
-0.896
4.427
19
noncoding
-0.335322553
LLIYENNK
MTCSPLLLTLLIHCTGSWAQSVLTQPPSVSAAPGQKVTISCSGSSSDMGNYAVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLWPED
lnc-VPS13B-1:2
OV
17
0.0396233
noncoding
48
chr8
98995988
99003223
+
0.2957
lnc-VPS13B-1
0.974
-3.715
-3.489
-6.248
1
noncoding
-0.37381794
FNTNNLLLMGSQHLLSK
n[145]FNTNNLLLM[147]GSQHLLSK
LRSLFLDIPQRFNTNNLLLMGSQHLLSKLLSSDLGNINYRSLWTKVFC
lnc-VPS13B-1:2
OV
9
0.0396233
noncoding
48
chr8
98995988
99003223
+
0.9839
lnc-VPS13B-1
0.974
-3.715
-3.489
-6.248
10
noncoding
-0.37381794
SLFLDIPQR
n[145]SLFLDIPQR
LRSLFLDIPQRFNTNNLLLMGSQHLLSKLLSSDLGNINYRSLWTKVFC
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