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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VSTM2B-9:8 | LUAD | 10 | 0.796471 | coding | 214 | chr19 | 27793487 | 27984984 | + | 0.6855 | lnc-VSTM2B-9 | 1 | 0 | 9.375 | 8.706 | 1 | noncoding | -0.337818419 | YYLSCSTTRK | n[230]YYLSCSTTRK | LMIQGQAQSSCKNLKQMVSTKHFTKKYSSCSTIYLDDSTASQPHLTIIVKSNELERQFLQLIDYNVEVSGSVYAKYYFDLRSLAKDNSLHFPVYLLNKERAQNLEAISRMEDAKIFYSEGPSALIISLIFSALKPLTLEGRNEGLYHVNPSSKKFGKYYLSCSTTRKVSIFKRRKISKLRGLWATRIALHRKKMGSLQCNNSRTLFCLFKRKQV |
lnc-VSTM4-1:3 | OV | 18 | 0.81489 | coding | 59 | chr10 | 48976551 | 48980402 | - | 0.8559 | lnc-VSTM4-1 | 0.079 | -5.353 | -4.986 | -3.356 | 3 | noncoding | -0.360686354 | NLGNSLLWMITGSGMQSK | n[145]NLGNSLLWMITGSGMQSK | LMLNRNLQIQWHCQNQLNGSEKAALRNLGNSLLWMITGSGMQSKQGANGSTQDDRILTS |
lnc-VSTM4-1:3 | OV | 18 | 0.81489 | coding | 59 | chr10 | 48976551 | 48980402 | - | 0.8559 | lnc-VSTM4-1 | 0.079 | -5.353 | -4.986 | -3.356 | 3 | noncoding | -0.360686354 | NLGNSLLWMITGSGMQSK | n[145]NLGNSLLWMITGSGM[147]QSK | LMLNRNLQIQWHCQNQLNGSEKAALRNLGNSLLWMITGSGMQSKQGANGSTQDDRILTS |
lnc-VSTM5-3:1 | OV | 10 | 0.0412237 | noncoding | 43 | chr11 | 94026968 | 94028659 | - | 0.7049 | lnc-VSTM5-3 | 0.454 | -4.904 | -2.068 | -3.501 | 7 | noncoding | -0.342652157 | MRLRQMSLGK | n[145]MRLRQM[147]SLGK | LSLRRNVLHQGEKKMRLRQMSLGKRKGGDGDCTFSLVKLHPPY |
lnc-VSTM5-3:1 | OV | 10 | 0.0412237 | noncoding | 43 | chr11 | 94026968 | 94028659 | - | 0.7049 | lnc-VSTM5-3 | 0.454 | -4.904 | -2.068 | -3.501 | 7 | noncoding | -0.342652157 | MRLRQMSLGK | n[145]M[147]RLRQM[147]SLGK | LSLRRNVLHQGEKKMRLRQMSLGKRKGGDGDCTFSLVKLHPPY |
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