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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VSIG10L2-2:1 | OSCC | 10 | 0.0666314 | noncoding | 67 | chr11 | 125927115 | 125928829 | + | 0.8095 | lnc-VSIG10L2-2 | 0.077 | -3.962 | -3.02 | -5.066 | 1 | noncoding | -0.357865455 | LLDSSSEIQK | n[145]LLDSSSEIQK | MWIFHPPLNIKLLDSSSEIQKTHVNWDDSWLRDVPWCLANPRRGPQAHVWNCLALLYQFISLPSLLR |
lnc-VSIG4-2:1 | CCRC | 13 | 0.953715 | coding | 137 | chrX | 65956288 | 65957196 | - | 0.8017 | lnc-VSIG4-2 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.299071628 | SDLYSSGRDQVGR | n[230]SDLYSSGRDQVGR | LHLQDQFAVAVEWEEELLYHVEEIVTEVHLEGNRCPLVESSTYTRAPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDQVGRQERGLPPSMERGYPPPRDSYSSSSRGTPRGGGRGGSRSDRGGGRSRY |
lnc-VSIG4-2:1 | PRAD | 7 | 0.953715 | coding | 146 | chrX | 65956288 | 65957196 | - | 0.8382 | lnc-VSIG4-2 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.299071628 | ESLPSCR | ESLPSCR | MEKPSRWNKPPNRHLKVVDVDRLHLQEVEALQEFLEVEEEEVEEPGNLPHGEDTWMTGGYSMNFNMSSSRGPLPVKRGPPPRSGGLPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYRGPPRRESLPSCRELHLHEGAPILWWKQSL |
lnc-VSIG4-3:1 | EOGC | 15 | 0.669472 | coding | 124 | chrX | 65821254 | 65822249 | - | 0.5025 | lnc-VSIG4-3 | 1 | 0 | 0 | 0 | 1 | coding | 0.678955296 | LLTYAETNICPTNWK | n[145]LLTYAETNICPTNWK | LVYLEKLLTYAETNICPTNWKRIGLRAILASKVWNHQAVWNMDYCQIFKDITGEDMNEMERHFLMLLQFNLNVPASVYAKYYFDLRSLADDNNLNFLFAPLSKKRAQNLEAISRLCEDKDLWRA |
lnc-VSIG4-3:1 | OSCC | 19 | 0.669472 | coding | 124 | chrX | 65821254 | 65822249 | - | 0.6764 | lnc-VSIG4-3 | 1 | 0 | 0 | 0 | 1 | coding | 0.678955296 | HFLMLLQFNLNVPASVYAK | n[145]HFLM[147]LLQFNLNVPASVYAK | LVYLEKLLTYAETNICPTNWKRIGLRAILASKVWNHQAVWNMDYCQIFKDITGEDMNEMERHFLMLLQFNLNVPASVYAKYYFDLRSLADDNNLNFLFAPLSKKRAQNLEAISRLCEDKDLWRA |
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