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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VWC2L-1:13 | BRCA-HER2-enriched | 12 | 0.106921 | noncoding | 100 | chr2 | 214810228 | 214850229 | + | 0.9321 | lnc-VWC2L-1 | 1 | 5.3 | -4.482 | -4.083 | 7 | coding | 0.716179713 | GAFGMPQGTVAR | n[145]GAFGMPQGTVAR | MRGAFGMPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKLPGHQKIHISKKWGFTKFNADEFEDMVAEKWLIPDGCGVKYIPNRGPLDKWRALHS |
lnc-VWC2L-1:13 | BRCA-Luminal A | 12 | 0.106921 | noncoding | 100 | chr2 | 214810228 | 214850229 | + | 0.9321 | lnc-VWC2L-1 | 1 | 5.3 | -4.482 | -4.083 | 7 | coding | 0.716179713 | GAFGMPQGTVAR | n[145]GAFGMPQGTVAR | MRGAFGMPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKLPGHQKIHISKKWGFTKFNADEFEDMVAEKWLIPDGCGVKYIPNRGPLDKWRALHS |
lnc-VWC2L-1:13 | BRCA-Luminal A | 9 | 0.106921 | noncoding | 38 | chr2 | 214810228 | 214850229 | + | 0.9983 | lnc-VWC2L-1 | 0.871 | -5.534 | -4.85 | -4.606 | 16 | coding | 0.716179713 | HGIPGTCAK | n[145]HGIPGTCAK | MHGIPGTCAKHFLRITPFILPRKEGKSIKSILPPDISS |
lnc-VWC2L-1:13 | BRCA-HER2-enriched | 9 | 0.106921 | noncoding | 38 | chr2 | 214810228 | 214850229 | + | 0.9983 | lnc-VWC2L-1 | 0.871 | -5.534 | -4.85 | -4.606 | 16 | coding | 0.716179713 | HGIPGTCAK | n[145]HGIPGTCAK | MHGIPGTCAKHFLRITPFILPRKEGKSIKSILPPDISS |
lnc-VWC2L-1:13 | BRCA-Basal-like | 9 | 0.106921 | noncoding | 38 | chr2 | 214810228 | 214850229 | + | 0.9983 | lnc-VWC2L-1 | 0.871 | -5.534 | -4.85 | -4.606 | 16 | coding | 0.716179713 | HGIPGTCAK | n[145]HGIPGTCAK | MHGIPGTCAKHFLRITPFILPRKEGKSIKSILPPDISS |
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