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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VWA5A-2:1 | OV | 15 | 0.109246 | noncoding | 79 | chr11 | 124080504 | 124082900 | + | 0.9939 | lnc-VWA5A-2 | 0.852 | 0 | 0 | 0 | 7 | noncoding | -0.404113158 | LFHCSPSHELHHMAR | n[145]LFHCSPSHELHHMAR | LFHCSPSHELHHMARNQGVQGDGHTQVRSLNHRIAESSRSELLSMATKSCRLQVEQCRLRKQRGEQGRLRKLHAHCLQR |
lnc-VWA5B1-2:1 | HCC | 22 | 0.0395799 | noncoding | 95 | chr1 | 20380115 | 20381540 | + | 0.6078 | lnc-VWA5B1-2 | 0.894 | -4.464 | 0 | 0 | 1 | noncoding | -0.319806493 | GLLNFLPAGNQDGGLGKPGTAR | GLLNFLPAGNQDGGLGKPGTAR | LINSESKQPSQNDCNVRELKKKSLLSPFNKFLPFSEPQFSPSVKGLLNFLPAGNQDGGLGKPGTARKIGLGHRQEELERQPSLPLSQSERQEGFF |
lnc-VWA5B1-2:1 | HCC | 9 | 0.0395799 | noncoding | 95 | chr1 | 20380115 | 20381540 | + | 0.8516 | lnc-VWA5B1-2 | 0.894 | -4.464 | 0 | 0 | 1 | noncoding | -0.319806493 | KSLLSPFNK | KSLLSPFNK | LINSESKQPSQNDCNVRELKKKSLLSPFNKFLPFSEPQFSPSVKGLLNFLPAGNQDGGLGKPGTARKIGLGHRQEELERQPSLPLSQSERQEGFF |
lnc-VWA5B1-22:1 | OV | 13 | 0.0369172 | noncoding | 47 | chr1 | 20272017 | 20273599 | + | 0.996 | lnc-VWA5B1-22 | 1 | -4.728 | -5.029 | -4.839 | 3 | noncoding | -0.385372941 | LQHLPQPLLTVEK | n[145]LQHLPQPLLTVEK | LQHLPQPLLTVEKNKDFPITPLGHQSSMSYWALPEIRFSNWSLHWLQ |
lnc-VWA8-1:1 | EOGC | 9 | 0.758228 | coding | 61 | chr13 | 42042489 | 42048728 | - | 1 | lnc-VWA8-1 | 0.965 | -4.859 | -4.37 | -4.978 | 75 | coding | 0.646802612 | LVLAIFLNR | n[145]LVLAIFLNR | LSSKENTKLVLAIFLNRTKSPCQTVESLHLEKAFNLCYVHAFQYHSFRIFSVDMTFKVPPN |
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