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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
TMEM132D-AS1:18
OV
11
0.148699
noncoding
116
chr12
129109628
129113294
+
0.9462
TMEM132D-AS1
0.26
0
0
0
8
noncoding
-0.368486702
LGGSHGGMLLK
n[145]LGGSHGGMLLK
LGGSHGGMLLKCPFCPQGPSEATWSVSEHGQGAGWLLGLHARLLYGQPLRQHFLLGCPRIPSASCSQALPARFSLLPILLSQGPDLHRILKLSLPTPSPSFLYPSQLQSSINLWCT
TMEM132D-AS1:18
OV
11
0.148699
noncoding
116
chr12
129109628
129113294
+
0.9462
TMEM132D-AS1
0.26
0
0
0
8
noncoding
-0.368486702
LGGSHGGMLLK
n[145]LGGSHGGM[147]LLK
LGGSHGGMLLKCPFCPQGPSEATWSVSEHGQGAGWLLGLHARLLYGQPLRQHFLLGCPRIPSASCSQALPARFSLLPILLSQGPDLHRILKLSLPTPSPSFLYPSQLQSSINLWCT
TMEM161B-AS1:1
OV
23
0.0959648
noncoding
76
chr5
88268849
88290641
+
0.9171
TMEM161B-AS1
1
0
0
0
2
noncoding
-0.345618885
ELIVDNNALSILFVNTYNNATNK
n[145]ELIVDNNALSILFVNTYNNATNK
MSHDHATALQLGQQSETLFPKTTKTGFKYIATLEFSIKELIVDNNALSILFVNTYNNATNKKENLNSWTTLKVLLG
TMEM161B-AS1:1
OV
10
0.0959648
noncoding
76
chr5
88268849
88290641
+
0.8325
TMEM161B-AS1
1
0
0
0
9
noncoding
-0.345618885
YIATLEFSIK
n[145]YIATLEFSIK
MSHDHATALQLGQQSETLFPKTTKTGFKYIATLEFSIKELIVDNNALSILFVNTYNNATNKKENLNSWTTLKVLLG
TMEM161B-AS1:54
CCRC
15
0.437417
noncoding
44
chr5
88268890
88323525
+
0.9993
TMEM161B-AS1
0.064
0
0
0
1
coding
0.658914871
EEEGGGGGIEGEEGR
n[230]EEEGGGGGIEGEEGR
LSPGIQYQLEQHSETLSLQKEEEGGGGGIEGEEGRKKKKKKNFF
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