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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-WDR60-14:2 | LUAD | 14 | 0.0643908 | noncoding | 107 | chr7 | 158704989 | 158708397 | + | 0.9981 | lnc-WDR60-14 | 0.394 | 0 | 0 | 0 | 3 | noncoding | -0.331690995 | SLHTVPSSCPMSRK | n[230]SLHTVPSSCPM[147]SRK | LRARARPGASAEGVRGPGEGGALRAGGVVGRRKERKRERGRERKGLGRGEATGPCLDPREDPTPTWPAPVTALPAEGAPVRVVRSLHTVPSSCPMSRKNEVWQTSGG |
lnc-WDR60-3:1 | PRAD | 24 | 0.0658531 | noncoding | 46 | chr7 | 158974134 | 158977673 | + | 0.8872 | lnc-WDR60-3 | 0.269 | 0 | 0 | 0 | 9 | noncoding | -0.32098836 | TVALGDNDVTVGSSTVANSPSAGR | MKTVALGDNDVTVGSSTVANSPSAGRCWKCRGSGGSGMWELSVPFL | |
lnc-WDR61-2:1 | HCC | 9 | 0.0402742 | noncoding | 119 | chr15 | 78438203 | 78438852 | - | 0.6953 | lnc-WDR61-2 | 0.99 | -2.397 | -2.282 | -0.481 | 1 | noncoding | -0.278868527 | VGIGSPSFR | n[230]VGIGSPSFR | LRETRTRRRRPPPSSLANGGRAGEDGGPLPAPGVADGGQEAAGSRQRPPEREGCGSRPAVGWPALRVSRRRVGIGSPSFRGLGSKGGPAGRPRGEHNPSPEGLGACRATPGEKSKEFGA |
lnc-WDR63-6:1 | PRAD | 12 | 0.0357086 | noncoding | 99 | chr1 | 85201170 | 85203495 | + | 0.9956 | lnc-WDR63-6 | 1 | -1.79 | 0.864 | 0.742 | 5 | coding | 0.737879106 | EGVGEGGGAATR | LDSVLLRGSAIPSALAARLTPARGRGRSPAGEKTALAEAEAEAAAAPHDRRWPSPAPHILGITLPREGVGEGGGAATRMPRSPGPRRGARAGGGRVNAC | |
lnc-WDR63-6:1 | PRAD | 25 | 0.0357086 | noncoding | 99 | chr1 | 85201170 | 85203495 | + | 0.1858 | lnc-WDR63-6 | 1 | -1.79 | 0.864 | 0.742 | 1 | coding | 0.737879106 | GRSPAGEKTALAEAEAEAAAAPHDR | LDSVLLRGSAIPSALAARLTPARGRGRSPAGEKTALAEAEAEAAAAPHDRRWPSPAPHILGITLPREGVGEGGGAATRMPRSPGPRRGARAGGGRVNAC |
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