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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
lnc-WDR44-2:2
EOGC
8
0.0581071
noncoding
65
chrX
118451090
118451462
+
0.9984
lnc-WDR44-2
0.913
-5.424
-5.218
-4.622
8
noncoding
-0.479688964
SQVLESGK
n[145]SQVLESGK
MVLLKKKRSQVLESGKLGFASFPLAHSLGKLFILHYYYFLICNMGIPNLNCKDLLRNHVCVKLGA
lnc-WDR44-2:2
OV
8
0.0581071
noncoding
65
chrX
118451090
118451462
+
0.9911
lnc-WDR44-2
0.913
-5.424
-5.218
-4.622
51
noncoding
-0.479688964
SQVLESGK
n[145]SQVLESGK
MVLLKKKRSQVLESGKLGFASFPLAHSLGKLFILHYYYFLICNMGIPNLNCKDLLRNHVCVKLGA
lnc-WDR5-4:2
OV
17
0.212334
noncoding
60
chr9
134164982
134169532
+
0.9092
lnc-WDR5-4
0.079
-5.116
-3.431
-4.403
2
noncoding
-0.323140921
DLGGHSTLSDLAQNPWK
n[145]DLGGHSTLSDLAQNPWK
LGGQGWKDLGGHSTLSDLAQNPWKQPAMHGWRWLCPVSAGASGTPALTDAASPADCCIPR
lnc-WDR5-4:2
OV
7
0.212334
noncoding
114
chr9
134164982
134169532
+
0.975
lnc-WDR5-4
0.089
-4.031
-4.854
-3.867
35
noncoding
-0.323140921
KVDGAIR
n[145]KVDGAIR
LRLLLTAASQDEPSACTQGVPKCLLNKGMISVGIALRLMPSAPIRAHGSCQPLEVPLGPTNVSRPQEESAWLHVPGAWGRKVDGAIRVVTIGEYTLHSTRVSRDITHWILSLTF
lnc-WDR5-4:2
OV
24
0.212334
noncoding
60
chr9
134164982
134169532
+
0.2697
lnc-WDR5-4
0.079
-5.116
-3.431
-4.403
3
noncoding
-0.323140921
LGGQGWKDLGGHSTLSDLAQNPWK
n[145]LGGQGWKDLGGHSTLSDLAQNPWK
LGGQGWKDLGGHSTLSDLAQNPWKQPAMHGWRWLCPVSAGASGTPALTDAASPADCCIPR
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