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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-WDR4-1:3 | OV | 14 | 0.904345 | coding | 180 | chr21 | 42827613 | 42838647 | - | 0.6801 | lnc-WDR4-1 | 0.345 | 0 | 0 | 0 | 1 | noncoding | -0.290976343 | VQPGQHGETPQSTK | n[145]VQPGQHGETPQSTK | MIVPLHCSLGKRTRLLSQKKRKRQNQQFLTSHKCTDGQAILLLDIYPRRMKAMSLKRFAQKCSQQFHSQQLQTGNKPNVQFDLSKNQIPAHSSKGIYTALKGSRRAGCSGSRMYSQHFGRPRWVDHLRSGVRVQPGQHGETPQSTKNTKISQAWWRMPVIPATWEAEAGESPEPGRRRLR |
lnc-WDR4-2:1 | BRCA-Basal-like | 12 | 0.604145 | coding | 60 | chr21 | 42916802 | 42925646 | - | 0.9965 | lnc-WDR4-2 | 0.17 | 0 | 0 | 0 | 23 | noncoding | -0.349212158 | LLHTASCCLLAR | n[145]LLHTASCCLLAR | LLHTASCCLLARSPGSNQCKSLGAGPETCEGLPSTSPVDLPPLHLGKQATAAGQRKLLSL |
lnc-WDR4-2:1 | BRCA-Luminal B | 12 | 0.604145 | coding | 60 | chr21 | 42916802 | 42925646 | - | 0.9965 | lnc-WDR4-2 | 0.17 | 0 | 0 | 0 | 23 | noncoding | -0.349212158 | LLHTASCCLLAR | n[145]LLHTASCCLLAR | LLHTASCCLLARSPGSNQCKSLGAGPETCEGLPSTSPVDLPPLHLGKQATAAGQRKLLSL |
lnc-WDR4-2:1 | BRCA-Luminal A | 12 | 0.604145 | coding | 60 | chr21 | 42916802 | 42925646 | - | 0.9965 | lnc-WDR4-2 | 0.17 | 0 | 0 | 0 | 23 | noncoding | -0.349212158 | LLHTASCCLLAR | n[145]LLHTASCCLLAR | LLHTASCCLLARSPGSNQCKSLGAGPETCEGLPSTSPVDLPPLHLGKQATAAGQRKLLSL |
lnc-WDR4-2:1 | BRCA-HER2-enriched | 12 | 0.604145 | coding | 60 | chr21 | 42916802 | 42925646 | - | 0.9965 | lnc-WDR4-2 | 0.17 | 0 | 0 | 0 | 23 | noncoding | -0.349212158 | LLHTASCCLLAR | n[145]LLHTASCCLLAR | LLHTASCCLLARSPGSNQCKSLGAGPETCEGLPSTSPVDLPPLHLGKQATAAGQRKLLSL |
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