top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-XCR1-1:1 | BRCA-HER2-enriched | 7 | 0.463987 | noncoding | 38 | chr3 | 46017023 | 46020665 | - | 0.9959 | lnc-XCR1-1 | 0.017 | -3.111 | -5.298 | -4.449 | 8 | noncoding | -0.343870131 | LGGIPVK | n[145]LGGIPVK | LGGIPVKGRGSHGPTCQPTGGATTHHRWEKQHKEEIMR |
lnc-XCR1-1:1 | BRCA-Luminal B | 7 | 0.463987 | noncoding | 38 | chr3 | 46017023 | 46020665 | - | 0.9959 | lnc-XCR1-1 | 0.017 | -3.111 | -5.298 | -4.449 | 8 | noncoding | -0.343870131 | LGGIPVK | n[145]LGGIPVK | LGGIPVKGRGSHGPTCQPTGGATTHHRWEKQHKEEIMR |
lnc-XCR1-1:1 | CCRC | 9 | 0.463987 | noncoding | 181 | chr3 | 46017023 | 46020665 | - | 0.1749 | lnc-XCR1-1 | 0.822 | -0.599 | -2.345 | -4.783 | 2 | noncoding | -0.343870131 | RRTSLISER | MTLLKRSFQRVAHHEPRCLSLTTTSTGHHLLGFPSLHPQKPLLNLNWTLAGLSLPPNRDVLDTELQTSNHSWNIKKPTVVLQHLHLQFPSDRIQKRRTSLISERSMSPSSGQPQNSNGLNWSGNPSKAQTQFLPSPSVPGNVCGWLSELTGDHLLAFFLPLFSLTILAYISSSGQHQVLTP | |
lnc-XCR1-1:1 | CCRC | 8 | 0.463987 | noncoding | 181 | chr3 | 46017023 | 46020665 | - | 0.9981 | lnc-XCR1-1 | 0.822 | -0.599 | -2.345 | -4.783 | 33 | noncoding | -0.343870131 | RTSLISER | MTLLKRSFQRVAHHEPRCLSLTTTSTGHHLLGFPSLHPQKPLLNLNWTLAGLSLPPNRDVLDTELQTSNHSWNIKKPTVVLQHLHLQFPSDRIQKRRTSLISERSMSPSSGQPQNSNGLNWSGNPSKAQTQFLPSPSVPGNVCGWLSELTGDHLLAFFLPLFSLTILAYISSSGQHQVLTP | |
lnc-WNT10A-4:1 | OSCC | 12 | 0.22786 | noncoding | 35 | chr2 | 218909159 | 218929969 | + | 0.7478 | lnc-WNT10A-4 | 0.861 | 0 | 0 | 0 | 14 | noncoding | -0.334265385 | GGAASVVSEMPR | n[145]GGAASVVSEM[147]PR | MGGAASVVSEMPRRHFPHCLGYLTLLYLCKLLQQA |
Page 1 of 1
bottom of page