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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-XPOT-4:1 | CRC | 14 | 0.047409 | noncoding | 39 | chr12 | 64222336 | 64397065 | + | 0.6957 | lnc-XPOT-4 | 1 | -4.586 | -5.352 | -5.108 | 1 | noncoding | -0.306038728 | LSSPAPSVDAPPSK | LWQARRLSSPAPSVDAPPSKTFPSRPCAQFGSRQSMQEE | |
lnc-XPOT-4:1 | OV | 15 | 0.047409 | noncoding | 41 | chr12 | 64222336 | 64397065 | + | 0.5989 | lnc-XPOT-4 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.306038728 | SSSYGTYKNIGLGFK | n[145]SSSYGTYKNIGLGFK | LARSSSYGTYKNIGLGFKRSKETIEGTYIDKECLFTGNVSI |
lnc-XPOT-4:7 | PRAD | 23 | 0.145062 | noncoding | 79 | chr12 | 64396094 | 64397357 | + | 0.4111 | lnc-XPOT-4 | 0.138 | 0 | 0 | 0 | 5 | coding | 0.658814795 | GGAPATQEAEAGELLEPEGGGCR | GGAPATQEAEAGELLEPEGGGCR | MVAHTCNLNILEGRDRWTMRSRDRDHLGQHGETPSLLKIQKLAGRGGAPATQEAEAGELLEPEGGGCREPRSHHHTPAW |
lnc-XPOT-4:7 | PRAD | 13 | 0.145062 | noncoding | 79 | chr12 | 64396094 | 64397357 | + | 0.7725 | lnc-XPOT-4 | 0.138 | 0 | 0 | 0 | 1 | coding | 0.658814795 | VAHTCNLNILEGR | VAHTCNLNILEGR | MVAHTCNLNILEGRDRWTMRSRDRDHLGQHGETPSLLKIQKLAGRGGAPATQEAEAGELLEPEGGGCREPRSHHHTPAW |
lnc-XRCC1-2:1 | OV | 12 | 0.409178 | noncoding | 35 | chr19 | 43585935 | 43589687 | - | 0.963 | lnc-XRCC1-2 | 0.985 | -5.65 | -4.201 | -4.773 | 8 | noncoding | -0.331135906 | MYVHAGTQYAHR | n[145]MYVHAGTQYAHR | LGKSLYKWHLPHMVMVRIQRMYVHAGTQYAHRHIT |
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