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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-XIRP2-2:2 | BRCA-Luminal A | 7 | 0.0368596 | noncoding | 36 | chr2 | 167536958 | 167538972 | + | 0.9949 | lnc-XIRP2-2 | 0.039 | 0 | 0 | 0 | 10 | noncoding | -0.383872984 | SYLMAGR | n[145]SYLMAGR | MSSSVRSYLMAGRRACAGKLPFIKPSGLMRLIHSLP |
lnc-XIRP2-2:2 | BRCA-Basal-like | 7 | 0.0368596 | noncoding | 36 | chr2 | 167536958 | 167538972 | + | 0.9949 | lnc-XIRP2-2 | 0.039 | 0 | 0 | 0 | 10 | noncoding | -0.383872984 | SYLMAGR | n[145]SYLMAGR | MSSSVRSYLMAGRRACAGKLPFIKPSGLMRLIHSLP |
lnc-XIRP2-2:2 | BRCA-HER2-enriched | 7 | 0.0368596 | noncoding | 36 | chr2 | 167536958 | 167538972 | + | 0.9949 | lnc-XIRP2-2 | 0.039 | 0 | 0 | 0 | 10 | noncoding | -0.383872984 | SYLMAGR | n[145]SYLMAGR | MSSSVRSYLMAGRRACAGKLPFIKPSGLMRLIHSLP |
lnc-XIRP2-2:2 | BRCA-Luminal B | 7 | 0.0368596 | noncoding | 36 | chr2 | 167536958 | 167538972 | + | 0.9949 | lnc-XIRP2-2 | 0.039 | 0 | 0 | 0 | 10 | noncoding | -0.383872984 | SYLMAGR | n[145]SYLMAGR | MSSSVRSYLMAGRRACAGKLPFIKPSGLMRLIHSLP |
lnc-XIRP2-2:2 | BRCA-Luminal A | 7 | 0.0368596 | noncoding | 36 | chr2 | 167536958 | 167538972 | + | 0.9949 | lnc-XIRP2-2 | 0.039 | 0 | 0 | 0 | 10 | noncoding | -0.383872984 | SYLMAGR | n[145]SYLM[147]AGR | MSSSVRSYLMAGRRACAGKLPFIKPSGLMRLIHSLP |
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