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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZC3H12C-1:1 | OV | 12 | 0.0358215 | noncoding | 36 | chr11 | 109946560 | 109973237 | + | 0.1571 | lnc-ZC3H12C-1 | 0.04 | -5.628 | -4.451 | -5.985 | 1 | noncoding | -0.362888451 | YIGNPALIASGR | n[145]YIGNPALIASGR | MWVWRESYLSPFFFWSFPFSKYIGNPALIASGRGGN |
lnc-ZC3H12C-1:6 | HCC | 8 | 0.145366 | noncoding | 61 | chr11 | 109946568 | 109979053 | + | 0.9999 | lnc-ZC3H12C-1 | 0.319 | 0 | 0 | 0 | 357 | noncoding | -0.333276859 | GDGASEHR | n[230]GDGASEHR | MNRRAEEQQNGGAEKRGDGASEHREEFGWGWLERISAARWPNSRERSSSHSIPFPAPHPSH |
lnc-ZC3H12C-3:1 | CCRC | 15 | 0.661875 | coding | 83 | chr11 | 109982191 | 109983043 | + | 0.4331 | lnc-ZC3H12C-3 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.312252925 | MPDFYFHGDPEEIEK | n[43]MPDFYFHGDPEEIEK | MPDFYFHGDPEEIEKEEQAAAEKTVTKEEFQSEWTTLAPDSTATQPEVADWSEGKQVPLWPFSRFRLKTTAFNLLWKNGLQLP |
lnc-ZC3H12C-3:1 | CCRC | 9 | 0.661875 | coding | 83 | chr11 | 109982191 | 109983043 | + | 0.626 | lnc-ZC3H12C-3 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.312252925 | QVPLWPFSR | MPDFYFHGDPEEIEKEEQAAAEKTVTKEEFQSEWTTLAPDSTATQPEVADWSEGKQVPLWPFSRFRLKTTAFNLLWKNGLQLP | |
lnc-ZC3H12C-3:1 | EOGC | 22 | 0.661875 | coding | 83 | chr11 | 109982191 | 109983043 | + | 0.9892 | lnc-ZC3H12C-3 | 1 | 0 | 0 | 0 | 9 | noncoding | -0.312252925 | PDFYFHGDPEEIEKEEQAAAEK | n[145]PDFYFHGDPEEIEKEEQAAAEK | MPDFYFHGDPEEIEKEEQAAAEKTVTKEEFQSEWTTLAPDSTATQPEVADWSEGKQVPLWPFSRFRLKTTAFNLLWKNGLQLP |
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